Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  229 bits (584), Expect = 3e-64
 Identities = 132/375 (35%), Positives = 219/375 (58%), Gaps = 4/375 (1%)

Query: 287 YAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYM 346
           Y G+     ++  +A V SA    + ++ I   V+LVI +   + +  P++++N  +A +
Sbjct: 256 YLGTFVNADKI--NAPVQSARMTGLIMAVIGLIVSLVILHLGIKVLMAPVRRLNKAMADI 313

Query: 347 ARGD--MTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISER 404
             GD  +T+R++   R EFG L+RS +   +    ++  +  GS  L    S   + +  
Sbjct: 314 GSGDADLTQRLDDSARDEFGELARSFNQFVENIQTVVRDVQKGSAELGENVSSLRDTAST 373

Query: 405 AMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRI 464
           + + V+ Q+++ D VA AI E+  +A E+A++     D  + ADA+++   + VA +R  
Sbjct: 374 SRSSVESQQAEIDMVATAINEMSAAAGEIAQNAQQTADAANNADADSRASLETVAASRDA 433

Query: 465 TEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGF 524
            ++L+ ++ +A  + H LG+   +I ++L+VI+GIAEQTNLLALNAAIEAARAG+AGRGF
Sbjct: 434 VQKLSKEINAAAEVIHTLGKDVTSITTVLEVIQGIAEQTNLLALNAAIEAARAGEAGRGF 493

Query: 525 AVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSAL 584
           AVVADEVR LA RTQ+STEEI  MIE LQ+ +   V+VM  S   +   +E+ ++   AL
Sbjct: 494 AVVADEVRNLAQRTQSSTEEINDMIERLQKGANDAVDVMNASTAVSNVSMEKAQDAMDAL 553

Query: 585 QSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLA 644
             IA+ + +I +M  Q+A A++EQ  V++ +   +T IA+   E    A E+   S  + 
Sbjct: 554 NRIAEAITSISQMTSQIATASEEQTSVTEELNSSITRIADQGQEAAAAATENDVYSGQIE 613

Query: 645 DLAAKQQQLIAHFKV 659
            +     Q ++ F+V
Sbjct: 614 RIGTALNQNVSRFRV 628



 Score = 37.0 bits (84), Expect = 3e-06
 Identities = 44/225 (19%), Positives = 97/225 (43%), Gaps = 32/225 (14%)

Query: 265 IQNQQVDASLASSLAKLDDMAKYAGSIAQQSRMLADA-----AVSSANFWIMAVS----- 314
           +++QQ +  + ++   +++M+  AG IAQ ++  ADA     A S A+   +A S     
Sbjct: 378 VESQQAEIDMVATA--INEMSAAAGEIAQNAQQTADAANNADADSRASLETVAASRDAVQ 435

Query: 315 ----AISAAVAL-------VIGYTTARSIQKPLQKINHELAY-----MARGDMTRRINYP 358
                I+AA  +       V   TT   + + + +  + LA       AR     R    
Sbjct: 436 KLSKEINAAAEVIHTLGKDVTSITTVLEVIQGIAEQTNLLALNAAIEAARAGEAGRGFAV 495

Query: 359 TRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQ 418
              E   L++      ++  +++ ++  G+   V+  + S  +S  +M + Q+     ++
Sbjct: 496 VADEVRNLAQRTQSSTEEINDMIERLQKGANDAVDVMNASTAVSNVSMEKAQDAMDALNR 555

Query: 419 VAAAITELEVSATEVARSTDGAKDEVDRADAE----AKQGRQKVA 459
           +A AIT +    +++A +++      +  ++     A QG++  A
Sbjct: 556 IAEAITSISQMTSQIATASEEQTSVTEELNSSITRIADQGQEAAA 600