Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  196 bits (498), Expect = 2e-54
 Identities = 114/331 (34%), Positives = 188/331 (56%), Gaps = 2/331 (0%)

Query: 331 SIQKPLQKINHELAYMARG--DMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGS 388
           SI  PL      L  +A+G  D+++R++   + E   L+ + ++ A K G+++  +    
Sbjct: 215 SITSPLNDAIEALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLG 274

Query: 389 RHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRAD 448
           + L N+A       E +    +    +T  VA A+ ++  +  E+A +T  A D      
Sbjct: 275 QSLDNDAKLLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVK 334

Query: 449 AEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLAL 508
           ++A+Q +  +  T R TE+L  +++++  IT KLG+ S  IGSILDVIR IAEQTNLLAL
Sbjct: 335 SQAQQSKGVIDNTVRDTEKLVQELKASEAITQKLGQASGQIGSILDVIRAIAEQTNLLAL 394

Query: 509 NAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQE 568
           NAAIEAARAG  GRGFAVVADEVRALA RTQ ST EIQ +I  +Q     V++   ++Q 
Sbjct: 395 NAAIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQR 454

Query: 569 QTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHE 628
           Q+     + +E   A+ +I + +  I +M  Q+A A +EQ +V++ +  ++  I+E+   
Sbjct: 455 QSEELQAKAQEAGQAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEV 514

Query: 629 TEREARESASSSEVLADLAAKQQQLIAHFKV 659
           + +    ++ +++ L D++      +  FK+
Sbjct: 515 SVKANESNSRAAQSLQDISQDMSHTLGQFKI 545