Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  199 bits (507), Expect = 3e-55
 Identities = 131/381 (34%), Positives = 203/381 (53%), Gaps = 20/381 (5%)

Query: 280 KLDDMAKYAGSIAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKI 339
           K+DDMA   GSI     ++   AVS     I+AV  IS  +         RS+  PL+ I
Sbjct: 343 KMDDMATSLGSIL----VIVGLAVS-----ILAVVTISIVI---------RSVIAPLRLI 384

Query: 340 NHELAYMAR--GDMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASR 397
              +  +A   GD+T+ I   +  E  AL +  +    K  +L+S++ A +     E+  
Sbjct: 385 QGRVENLASADGDLTQSIEVDSHAELIALGKGFNSFIHKLKDLISELKALAGQTQEESLS 444

Query: 398 SAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQK 457
           SA+I+E     V  Q  + + V  A+ E+  +A EVA++++    E +          + 
Sbjct: 445 SAKIAELTRDSVHRQYGEIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVHLSEES 504

Query: 458 VATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARA 517
           +         ++ +   A     K+ E S NI  IL+VI  IA QTNLLALNAAIEAARA
Sbjct: 505 LTKAMDYVTTMSQESMQAKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARA 564

Query: 518 GDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQT 577
           G+ GRGFAVVADEVRALA++TQ+ST++I  +I+ LQ+  +    ++ +  E+ +  V QT
Sbjct: 565 GEQGRGFAVVADEVRALASKTQSSTDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQT 624

Query: 578 REMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESA 637
            +  ++L S+  ++  I      +A AA+EQ  V++ V  ++TGI++ A E  R A E+ 
Sbjct: 625 EQALTSLNSMVSQIEEISAQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQ 684

Query: 638 SSSEVLADLAAKQQQLIAHFK 658
            SS VLA+L  +Q Q +   K
Sbjct: 685 QSSVVLAELVKQQHQQLGKLK 705