Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  202 bits (514), Expect = 4e-56
 Identities = 128/355 (36%), Positives = 191/355 (53%), Gaps = 11/355 (3%)

Query: 305 SANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMA--RGDMTRRINYPTRCE 362
           SA   +++V AIS  V L++G         PL +++  LA +A   GD+T+RI   T+ E
Sbjct: 276 SAVVLLLSVLAISWLVNLLLG---------PLGRVSQALARIADGNGDLTQRIEVDTQDE 326

Query: 363 FGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARVQEQKSQTDQVAAA 422
            G L+ S +       +L+S I   +  L  +A RS + +  A+A +Q Q+ +   VA A
Sbjct: 327 VGVLADSFNRFVGSQHQLISHIRQLASELDADAERSLKTNHIAVAELQRQQQEVAMVATA 386

Query: 423 ITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLASDMESAVGITHKL 482
           +TE+  +  E+A + +       ++ A + QG++ V  TR     LA ++  A  +   L
Sbjct: 387 VTEMASATNEIAANAENTATAAQQSAASSFQGKELVNKTRSSINSLADEVAQATDVIEDL 446

Query: 483 GEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALATRTQTST 542
              + +I SIL  I+GIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR L+ RTQ ST
Sbjct: 447 SRHAQSISSILATIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDST 506

Query: 543 EEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIADRMGAIKEMADQVA 602
           +E+   IE LQ ++ + V +M  SQ      VE       AL+ I   +  I +MA Q+A
Sbjct: 507 QEVHATIETLQRTTAKAVSLMESSQMLAGNSVEDANAAAKALEEITQAVNVISDMAGQIA 566

Query: 603 HAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAKQQQLIAHF 657
            AA+EQ  V+  +  +   I +V  E    A+   + ++ L   A      +A F
Sbjct: 567 TAAEEQTQVTGEITQNTVAIKDVTDEITEAAKSDLTQAQALKARANDLNAQVATF 621