Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  193 bits (491), Expect = 2e-53
 Identities = 115/331 (34%), Positives = 189/331 (57%), Gaps = 2/331 (0%)

Query: 331 SIQKPLQKINHELAYMARG--DMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGS 388
           SI  PL      L  +A+G  D+++R++   + E   L+ + ++ A K G+++  +    
Sbjct: 215 SITSPLNDAIDALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLG 274

Query: 389 RHLVNEASRSAEISERAMARVQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRAD 448
           + L N+A +     E +    +    +T  VA A+ ++  +  E+A +T  A D  +   
Sbjct: 275 QSLDNDAKQLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAANSVK 334

Query: 449 AEAKQGRQKVATTRRITEQLASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLAL 508
            +A+Q +  +  T R TE+L  ++ ++  IT KLG+ S  IGSILDVIR IAEQTNLLAL
Sbjct: 335 NQAQQSQAVIDDTVRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIAEQTNLLAL 394

Query: 509 NAAIEAARAGDAGRGFAVVADEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQE 568
           NAAIEAARAG  GRGFAVVADEVRALA RTQ ST EIQ +I ++Q     V++   ++Q 
Sbjct: 395 NAAIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQT 454

Query: 569 QTRACVEQTREMDSALQSIADRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHE 628
           Q+     + RE  +A+ +I   +  I +M  Q+A A +EQ +V++ +  ++  I+E+   
Sbjct: 455 QSDELQAKAREAGNAMAAILQLIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEV 514

Query: 629 TEREARESASSSEVLADLAAKQQQLIAHFKV 659
           + +    ++ +++ L D++      +  FK+
Sbjct: 515 SVKANEGNSRAAQSLQDISQDMSHTLGQFKI 545