Pairwise Alignments

Query, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  204 bits (518), Expect = 1e-56
 Identities = 129/371 (34%), Positives = 196/371 (52%), Gaps = 2/371 (0%)

Query: 291 IAQQSRMLADAAVSSANFWIMAVSAISAAVALVIGYTTARSIQKPLQKINHELAYMARG- 349
           +AQ       A ++ A + I+  + I AA  +++    A S+ +P+ ++      +  G 
Sbjct: 268 VAQVPEAEVFALLTDAAYQILIWTLIIAAGFIMLAIVVAGSVSRPIAQVAAMFRDIGEGE 327

Query: 350 -DMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMAR 408
            D+ +R+      E   L++  +    K  + + ++   S  L   A   +  +++ +  
Sbjct: 328 GDLRQRLPVKGEDEIAQLAQGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLED 387

Query: 409 VQEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQL 468
             EQK +T  V  AI E+  +  E+A +   A      AD E+  G+  V   R    QL
Sbjct: 388 SHEQKDRTMMVVTAINEMGATVNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQL 447

Query: 469 ASDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVA 528
           + D+E    +   L   + +IG ILDVIR I+EQTNLLALNAAIEAARAG+AGRGFAVVA
Sbjct: 448 SQDVEQVGEVIESLATHTKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVA 507

Query: 529 DEVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIA 588
           DEVR LA+RT  ST E+Q MI+ LQ  + + V  M +S+ ++   V    E   +L  I+
Sbjct: 508 DEVRNLASRTAASTNEVQGMIDKLQSEASRAVNAMAQSRARSHEGVAAVDEASQSLVGIS 567

Query: 589 DRMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAA 648
           DR+G I +M  QVA A +EQ  V + +  +VT I E+   T   A+ +A +S  L  LA 
Sbjct: 568 DRIGLISDMNIQVAAATEEQSTVVEDINRNVTEINEITQRTASTAQAAAQASLALNQLAH 627

Query: 649 KQQQLIAHFKV 659
           +   L+A FKV
Sbjct: 628 RLDTLVAKFKV 638