Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 65/277 (23%), Positives = 98/277 (35%), Gaps = 67/277 (24%)

Query: 19  ASELVIESWRADDKAL--WEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKAG 76
           A  L   SW+ D+K +  W   +I  +EA +PG  +++  V    Y+ T+          
Sbjct: 28  AEVLKFVSWQKDEKGIGDWWGSVIKEWEAKHPGNTIEWTKVERSAYSDTM---------- 77

Query: 77  DLITCRPFDDSLALFKAGHLAEITEMAGMENFPSFAQAPWQTDSGA-------------- 122
                        LF  G   +I  +A  E F +FA   W  D G               
Sbjct: 78  -----------TTLFAGGTPPDIVHLASFE-FQTFANNGWLEDLGPWVEKTGLDLDGWSG 125

Query: 123 --------QTFCVPMASVIHGFFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLS 174
                    T C+ M      F YN+++  + G+ VP   E+F        A  R     
Sbjct: 126 QDICKFQDTTVCIMMLYYGTIFGYNEEMLKQAGVDVPTNYEEFL-------AAARATTKD 178

Query: 175 MSGSESWVASELGYQNIG---------PNYWKGEDGRLALINGQEHLDDSQYVKVFEELA 225
           ++G         G++  G          +Y      R     G+  +D  + V   E L 
Sbjct: 179 LNGDGIVDQFGTGHETKGGGGQYIAEIASYLFDAGARFTSAEGEVTIDTPEMV---EGLT 235

Query: 226 RWRAYLGEDGELRDY--GTSNELFTSGKAALYVAGSW 260
           RW+  + E+   RD   G   +LF  GK AL V G W
Sbjct: 236 RWKTVVKENLTPRDLSAGEVRKLFADGKIALKVDGPW 272