Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 31/303 (10%)

Query: 32  KALWEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKAGDLITCRPFDDSLALF 91
           +A+ EQ +   F+A +P + V+   +    Y   +  N  +    D+      +      
Sbjct: 41  RAVMEQ-MAEEFDAMHPDLSVELTVIDREAYKTQI-RNFLSANPPDVANWYAANRMRPYV 98

Query: 92  KAGHLAEITEM-AGMENFPSFAQAPWQTDSGAQTFCVPMASVIHGFFYNKKIFNELGLSV 150
            AG   +I+++ A  E   + A          + + VP      G +Y + I+NELGL  
Sbjct: 99  SAGLFEDISDLWAEPEIADALASTKGAMTLDGKQWGVPYTYYQWGVYYREDIYNELGLEE 158

Query: 151 PQTREQFFTVLDKVKADGRYIPLSMSGSESWVASE-LGYQNIGPNYWKGEDGRLALINGQ 209
           P+  E F +   K+   GR    ++     W A     Y N+  N   G D  +AL  G+
Sbjct: 159 PKDWETFKSNCQKILDSGRKC-FTIGTKFLWTAGGWFDYLNMRTN---GYDFHMALTKGE 214

Query: 210 EHLDDSQYVKVFEELARWRAYLG-----EDGELRDYGTSNELFTSGKAALYVAGSWEIAP 264
               D +  + F   A WR  +      ++ +   +  +      G+AA Y+ G++ +AP
Sbjct: 215 VAWTDDRVKQTF---ANWRELIDMGAFIDNHQSYSWQEALPFMVKGEAAAYLMGNFAVAP 271

Query: 265 F------TDKVD---FGVMRPPVAKQGDGCFFTDHTDIGMGMNPASKNPQAAMAFLQWLT 315
                   D++D   F  + P V    D    T H   G      ++N +AA AFL+++ 
Sbjct: 272 LREAGLGNDQLDFYQFPSINPDVELAEDAPTDTFHIPSG------AQNKEAARAFLRFVV 325

Query: 316 TPE 318
           + +
Sbjct: 326 SAD 328