Pairwise Alignments

Query, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., carbohydrate ABC transporter substrate-binding protein, CUT1 family from Paraburkholderia bryophila 376MFSha3.1

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 30/305 (9%)

Query: 29  ADDKALWEQKIIPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKAGDLITCRPFDDSL 88
           A  +A+W Q ++  F+ A+PGI VK + +    Y   L   L    A D++     +   
Sbjct: 41  ASQRAVW-QSVVDEFKKAHPGIDVKVSFIDEEAYKVQLPGWLST-VAPDIVNWHDGERMA 98

Query: 89  ALFKAGHLAEIT-EMAGMENFPSFAQAPWQTDSGAQTFCVPMASVIHGFFYNKKIFNELG 147
              + G   +++ + A       +A     +    + +  P      G FY K +F + G
Sbjct: 99  YYAQRGLFEDLSGDWAKNSWNDMYASTKEASSYKGRQYAAPTVYYSWGMFYRKDLFQKAG 158

Query: 148 LS-VPQTREQFFTVLDKVKADGRYIPLSMSGSESW-VASELGYQNIGPNYWKGEDGRLAL 205
           +S  P+T +QF     K+KA G   P++++G ++W +A    Y ++  N   G      L
Sbjct: 159 ISGEPKTWDQFLDDCKKLKAAG-ITPIAVAGRDAWTLAGWFDYLDLRLN---GNAFHQKL 214

Query: 206 INGQEHLDDSQYVKVFEELARWR-----AYLGEDGELRDYGTSNELFTSGKAALYVAGSW 260
           + G+    D +  KV+     W+      Y  ++    D  +       GKAA+ + G++
Sbjct: 215 MAGEIAYTDPRVKKVY---TTWKQLIDAGYFIDNSLSYDLDSVQPFLFQGKAAMMLMGTF 271

Query: 261 EIAPFTDKV-------DFGVMRPPVAKQGDGCFFTDHTDIGMGMNPASKNPQAAMAFLQW 313
             A F   V        F ++   V    DG   + H      +   +KN   A  FL +
Sbjct: 272 ITAGFPPNVKPEMGYFQFPIIDANVPTAEDGPVESLH------IPSKAKNKADAHTFLAF 325

Query: 314 LTTPE 318
           + TPE
Sbjct: 326 VETPE 330