Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  226 bits (577), Expect = 1e-63
 Identities = 169/547 (30%), Positives = 281/547 (51%), Gaps = 21/547 (3%)

Query: 7   LAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPS----MMLVNGIKYN 62
           L   ++I + F +  L  +A   Y  + L  ++     +     P     M++  G++ N
Sbjct: 4   LTTAQRIVIGFAIAPLALIALALYALSDLAMLRDQAEQIVRQDWPKIDPIMVIATGVRDN 63

Query: 63  MSSVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNL 122
             + R     LL   + A++ + I   +   Q+I Q  +  E        ++ +  +K  
Sbjct: 64  ARNTR----DLLIDKNNAQVQQSI---DATRQRITQAFATLEPLFDQPEGKAAYAELKKR 116

Query: 123 WNEYLRQLGSFNNDILQKEMIKAQQDLQRS-LPTFEKLETAIDELLKLNLSYVDNNRSEL 181
              Y+         I Q    +A   L++  +P   ++  +++ ++ +    V   R  L
Sbjct: 117 REAYVAAFVQVQALIRQGATDEAMTQLKQGVIPAELEVYKSLEGMMAMQ-GKVFVEREHL 175

Query: 182 TELIDNISEFSVASIV-ALLAFMSAVTWLLTNLICSPLMQVVTQA----NAIAEGNLAHR 236
            +   N +  ++ ++V A LA ++ V  L+T  +  PL      A    N IA+G+L  R
Sbjct: 176 AQARYNDARRNMLALVLACLALVTTVAILVTRSVTRPLGGEPNDAARVLNLIAQGDLTIR 235

Query: 237 LDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQ 296
           +    +G      +      MQ +L  MV  I  S  ++A + +E+SAVS QTS  +Q+Q
Sbjct: 236 VP---VGVGANDSVMSNMHDMQQSLNSMVRHIAASVDRVASSSEELSAVSSQTSSTLQLQ 292

Query: 297 QEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEI 356
             E+ Q A A+ +M + V EVARN    S+ASR S Q A  G +Q++    SI  + + +
Sbjct: 293 GHEIEQAAAAVNQMTAAVDEVARNAVSTSEASRVSEQTAQRGREQVQETVASITALAEGV 352

Query: 357 GRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 416
             +  R+ +L  + Q I+ V+DVI +IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR
Sbjct: 353 TDSSGRIQQLAGRVQDISSVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVR 412

Query: 417 SLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSS 476
           +LA +TQ ST +I  +I N++  +  A  +  N+ EL+   +  +Q +  A+++I H  S
Sbjct: 413 ALAHRTQDSTREIEGMIGNIRLDSGHAVSSMQNNSELVQATLLVAQRSGDALDEIAHSIS 472

Query: 477 QIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQD 536
           QI +  + IASA  +Q  V+ E+ RN+  I   ++QV  G+     +  +L+Q+A  L +
Sbjct: 473 QINERNLMIASATEQQALVAREVDRNLVDIRNLSEQVMLGARHTDTAGQDLAQMAGSLHE 532

Query: 537 TVQRFRL 543
           TV RF++
Sbjct: 533 TVARFKV 539