Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  260 bits (664), Expect = 1e-73
 Identities = 180/543 (33%), Positives = 299/543 (55%), Gaps = 9/543 (1%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           + L I  + A+ F +IA++    G +    + +I+   + +    LPS+   + I+  M 
Sbjct: 4   RQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIREWML 63

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWN 124
            +R   + +    D   IA     M+   +++++ ++ YE+ + T   ++++   K  + 
Sbjct: 64  RIRTISLRMALDQDPKNIAVYRGQMDTRDKELSEKIAAYEKLVVTPEGKALYDQFKQTFA 123

Query: 125 EY---LRQLGSFNNDILQKEMIKAQQ-DLQRSLPTFEKLETAIDELLKLNLSYVDNNRSE 180
            Y   + Q  +      + E+IK    D++  +    K    + EL    +S +++ +S+
Sbjct: 124 AYRTGIAQSFTLAEQGRRDELIKLLLVDMKTVVDGSGKQLNDLAELFSKQVS-IESQKSQ 182

Query: 181 LTELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRK 240
                ++    S+  + A LA + A+  LLT  I  PL + +  A  +A G+L   ++  
Sbjct: 183 -EHYANSRMVVSLFVVFAALATV-ALAMLLTRSIVKPLGEALNAAENVARGDLTRPIE-- 238

Query: 241 TIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEV 300
           T G+DE+  L  A + MQ NLR  ++ I  SA QLA A DE++AV+  ++Q +Q Q  E+
Sbjct: 239 THGNDEVSRLLKALAAMQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEI 298

Query: 301 MQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTE 360
            Q ATA+ EM + V EVARN    SDA+R SS+ A++G Q++    D+I  +  ++  T 
Sbjct: 299 EQAATAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTG 358

Query: 361 QRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAG 420
             V  L +Q+Q I  V+DVI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA 
Sbjct: 359 GLVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAY 418

Query: 421 KTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIAD 480
           +TQQST +I +++Q +++ A +A ++   S       +  ++    A++ I    ++I +
Sbjct: 419 RTQQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHE 478

Query: 481 MTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQR 540
             + IASA  EQ  V+ E+ RN+  I + + + A G+   + S  ELSQLA+ L+  VQR
Sbjct: 479 RNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQR 538

Query: 541 FRL 543
           F++
Sbjct: 539 FQV 541