Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  259 bits (661), Expect = 2e-73
 Identities = 187/548 (34%), Positives = 288/548 (52%), Gaps = 23/548 (4%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           ++L I  +  + F VIAL+ +  G +  N +  I+   L +    +PS+  +  +  N+ 
Sbjct: 4   RSLNIAPRAFLGFAVIALLVVILGVFAANRMSVIRQASLEMEQTQVPSVGYLANVLENVL 63

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWN 124
            +R     +L + D A + E    +    +++ +  S Y     T  E  ++        
Sbjct: 64  RMRILSFRILVNRDPASLTEAESRIGVLVEKLNKANSSYAALPSTPQEAELYKVFSATLE 123

Query: 125 EYLRQLGSFNNDILQKEMIKAQQ-----DLQRSLPTFEKLET-----AIDELLKLNLSYV 174
           +YL+          QKEM+   +     +L+  + T  K  T      +++L+ +N++  
Sbjct: 124 KYLQA---------QKEMLDLSRQNKADELRTHINTRIKEGTDLMGEQLNKLIAINVAGA 174

Query: 175 DNNRSELTELIDN-ISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNL 233
             + ++  E  D+ I+   + SI A LA +  +  LLT  I +PL + +  A  IA GNL
Sbjct: 175 SESSAKAGEHYDSAITGIIIVSISAALATV-VLALLLTRSIVAPLNRALEAARTIASGNL 233

Query: 234 AHRLDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGM 293
              +     G DE G L  A + MQ +LR  +E+I  SATQL  A  E+SAV++++S+G+
Sbjct: 234 VQVIADD--GKDEPGRLLQALATMQVSLRQTIEQIAGSATQLGAAAQELSAVTQESSRGL 291

Query: 294 QIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVN 353
           Q Q  E+ Q ATA+ EM + V EVARN    S+AS  S+Q A  G  ++    D+IQ + 
Sbjct: 292 QQQHNEIEQAATAVNEMTAAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMT 351

Query: 354 QEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 413
            ++  T   +  L  Q + I  V+DVI  IAEQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 352 HDVQATASMIEGLAVQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVAD 411

Query: 414 EVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRH 473
           EVR+LA +T QST +I +++  +Q    +A ++   S +     +E ++    A+EQI  
Sbjct: 412 EVRALAHRTAQSTQEIEKMVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQ 471

Query: 474 QSSQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQ 533
              QI +  + IASA  EQ  VS E+ RN+  I + A Q A G+   + +  ELS+LA  
Sbjct: 472 SIHQINERNLVIASASEEQAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVG 531

Query: 534 LQDTVQRF 541
           L   V RF
Sbjct: 532 LNAMVARF 539