Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  227 bits (579), Expect = 7e-64
 Identities = 136/351 (38%), Positives = 211/351 (60%), Gaps = 4/351 (1%)

Query: 193 VASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELAD 252
           VA++  LL  ++A  W++T  I +PL   +   N IA G+L+  +       DELG+L  
Sbjct: 172 VAAMTLLLGALAA--WIITQQIVNPLQYTLQAVNRIARGDLSEPVQVNR--RDELGQLQS 227

Query: 253 ACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKS 312
              +M  NL  ++E I +   Q+A A +++SAV+EQT+ G+  Q+ E   +ATAM+EM +
Sbjct: 228 GLQQMMLNLHELIEGIRSGVIQVASAAEQLSAVTEQTNAGVNNQKTETDHVATAMSEMTA 287

Query: 313 TVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQ 372
           TV  VAR+ E AS A+  + Q A+ G Q +      I+ + +E+ ++   V  L+ Q+++
Sbjct: 288 TVQNVARDAEEASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAVRHLQEQSEK 347

Query: 373 INMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEI 432
           I  V+DVI  +A+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA +TQ+ST +I  +
Sbjct: 348 IGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLALRTQRSTEEIESL 407

Query: 433 IQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQ 492
           +  +Q+          +S+ L    VE +     A+E I  + S I  M  QIA+A  +Q
Sbjct: 408 VAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQQIATAAEQQ 467

Query: 493 DSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
            +V+EE++R++  + + ++Q A      A S  EL++L  +L+  V RF++
Sbjct: 468 SAVAEEINRSVINVRDISEQTASTCEETASSSTELARLGHELERLVGRFKV 518