Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  256 bits (654), Expect = 2e-72
 Identities = 170/537 (31%), Positives = 280/537 (52%), Gaps = 5/537 (0%)

Query: 9   IGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMSSVRR 68
           I  +  + F +I  + LA G +    +  I++   N+  +++PS+  +N        +R 
Sbjct: 3   IAPRAFLGFALIGALMLALGVFALTQMSKIRTSGENIAQNSVPSIKALNEFTQLTLRLRV 62

Query: 69  AQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWNEYLR 128
               LL + +     +    +    QQI    + YE+ I    ER+ +  +  L  +Y R
Sbjct: 63  LSYRLLVNREPDIQQKTYDLVEQRSQQIRAAQTTYEKLISASDERAAYDQLVQLLGQY-R 121

Query: 129 QLGSFNNDILQKEMIKAQQDLQRS--LPTFEKLETAIDELLKLNLSYVDNNRSELTELID 186
           QL      + +   +   + L  +  L   + +  AID L+++N    +       +   
Sbjct: 122 QLEERMKTLSRNNQVDELRALLNTELLSNSDAINAAIDRLVEINNLQAEALNKGAAQQYS 181

Query: 187 NISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDE 246
           +   + V  ++          WLLTN I  P+   +  A  IA+GNL   +     G DE
Sbjct: 182 SAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPIT--VDGSDE 239

Query: 247 LGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATA 306
            G L  A S MQ  LR  ++ I  SATQLA A +E+++V++++++G+  Q  E+ Q ATA
Sbjct: 240 AGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAATA 299

Query: 307 MAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLEL 366
           + EM S V EVARN    S+AS++++  A  G   ++    +I+ ++ ++  T   +  L
Sbjct: 300 VNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAALIGNL 359

Query: 367 ESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQST 426
             +++ I  V+DVI  +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQQST
Sbjct: 360 ADESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQST 419

Query: 427 GDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIA 486
            +I  +I ++Q+  + A ++  NS E     +  ++    +++ I     +I +  + IA
Sbjct: 420 SEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIVEINERNLVIA 479

Query: 487 SACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           SA  EQ  V+ E+ RN+  I + + Q A G++  + + AELS+LA  L + V RF L
Sbjct: 480 SAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAASAELSRLAVDLNNMVGRFSL 536