Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  241 bits (616), Expect = 5e-68
 Identities = 171/524 (32%), Positives = 274/524 (52%), Gaps = 41/524 (7%)

Query: 32  YNSLHTIKSDV--LNLTDDTLPSMMLVNGIKYNMS----SVRRAQISLLSSTDEAEIAE- 84
           Y  + T+ SDV  +   D+       +   K +       VR    +  + T+   +A+ 
Sbjct: 145 YKLIETLDSDVRKMGAGDERFTQFQAITQAKQDFMLARYEVRGYTTNSNADTERKAVAQL 204

Query: 85  -----DIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWNEYLRQLGSFNNDILQ 139
                 ++ +N+H+    QD  R                ++N   +Y   + +F   +  
Sbjct: 205 DDAIASLKPLNEHFSSTRQDELRQ---------------LENTLAQYRSAVQAFK--LAT 247

Query: 140 KEMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISEFSVASIVAL 199
            ++++A++++     T   + T  ++L ++ L   D   ++   L        V++++AL
Sbjct: 248 ADVVQARKEMTDQGAT---IVTLSEQLYQIQLDRRDAESAQARTLQ------LVSTLLAL 298

Query: 200 LAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELADACSKMQN 259
           L  + A   ++T  I  PL + +T    IA G+L+H +       DELG L    ++M  
Sbjct: 299 LVGVIAAV-IITRQITGPLRETLTVVERIASGDLSHTVI--VTRRDELGVLQQGIARMGV 355

Query: 260 NLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVAR 319
            LR ++  I    TQ+A A +E+SAV+EQTS G+  Q+ E  Q+ATAM EM +TV EVAR
Sbjct: 356 TLRDLISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVAR 415

Query: 320 NTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDV 379
           N E AS A+  +   A  G + +      I+ +  E+ R+   +  L+ ++ +I  V+DV
Sbjct: 416 NAEEASQAAAAADGEARAGDKVVSEAIAQIERLASEVVRSTDAMTVLQQESDKIGSVMDV 475

Query: 380 ISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQAC 439
           I  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ+ST +I  ++  LQ  
Sbjct: 476 IKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNG 535

Query: 440 AQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEEL 499
            Q+     NNSR L +  V  +++  +++  I    S I  M  QIA+A  +Q +V+EE+
Sbjct: 536 TQQVAAVMNNSRSLTDSSVALTRKAGESLGNITRTVSNIQSMNQQIAAAAEQQSAVAEEI 595

Query: 500 SRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           SR+I  + + ++Q A  S   A S  EL++L +QLQ  V  FR+
Sbjct: 596 SRSIINVRDVSEQTAAASEETAASSVELARLGNQLQMMVSHFRV 639