Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  226 bits (577), Expect = 2e-63
 Identities = 146/386 (37%), Positives = 230/386 (59%), Gaps = 12/386 (3%)

Query: 166 LLKLNLSYVDNNRSELTELIDNISE---FSVASIVALLAFMSA-VTWLLTNLICSPLMQV 221
           +L+L L+ V  +   L + +D+  +   F +A +  ++A +   V WL+ + I  PL Q+
Sbjct: 331 MLQLPLNAVMADLQALQKDLDHQRQADIFGMAIVGLVIAGIGLLVIWLVGHGIARPLKQM 390

Query: 222 VTQANAIA--EGNLAHRL--DRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAH 277
           V   + IA  EG+L  RL  DR     DELG +A   +   + L+ M+ +++TS   ++ 
Sbjct: 391 VAMLDDIAQGEGDLTRRLVSDRA----DELGAIARGFNTFLSKLQGMITQVVTSVQSVSD 446

Query: 278 AVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANV 337
           + +  + ++ +T+QG+  Q  E+ Q+ATA+ EM +T  +VARN   A+ A+  + Q A+ 
Sbjct: 447 SSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQ 506

Query: 338 GSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIE 397
           G Q +R  + SI  +  EIG+    V  L   ++ IN ++  I  IAEQTNLLALNAAIE
Sbjct: 507 GMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIE 566

Query: 398 AARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHC 457
           AARAGEQGRGFAVVADEVR+LA KTQQ+T +I  +IQ LQ   +       +S+   +  
Sbjct: 567 AARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQTRTDES 626

Query: 458 VEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGS 517
           V+ + +  QA+E I    S I DM  QIASA  EQ +V+++++RN+  I + A +VA G+
Sbjct: 627 VQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQVANEVASGA 686

Query: 518 SSAAQSCAELSQLASQLQDTVQRFRL 543
             ++ + A L++LA Q +  + +FR+
Sbjct: 687 DESSAASAGLTKLAEQQRRLINQFRV 712