Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  243 bits (619), Expect = 2e-68
 Identities = 167/467 (35%), Positives = 252/467 (53%), Gaps = 34/467 (7%)

Query: 79  EAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWNEYLRQLGSFNND-- 136
           +A IA  ++ +N H+    QD  R  +S   ++  +            L+   + NND  
Sbjct: 205 DAAIAS-LKTLNTHFADSQQDALRQLQSALLNYRNA------------LQAYKAANNDAV 251

Query: 137 ILQKEMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISEFSVASI 196
           + ++EM     D+           T  D L ++ L   D   ++   L        ++++
Sbjct: 252 VARQEMTVQGNDIV----------TRSDALYQIQLDRRDAESTQARTLQ------LISTV 295

Query: 197 VALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELADACSK 256
           +ALL  + A   ++T  I  PL + +     IA G+L H  D      DELG L    ++
Sbjct: 296 LALLVGVLAAV-IITRQITRPLRETLAVVERIAGGDLTH--DVHVTRRDELGVLQQGIAR 352

Query: 257 MQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAE 316
           M   LR ++  I    TQ+A A +E+SAV+E+TS G+  Q+ E  Q+ATAM EM +TV E
Sbjct: 353 MGVTLRELISGIRDGVTQIASAAEELSAVTEETSAGVNSQKIETDQVATAMHEMTATVQE 412

Query: 317 VARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMV 376
           VARN E AS A+  +   A  G + +      I+ +  E+ R+ + +  L+ ++ +I  V
Sbjct: 413 VARNAEEASQAAAAADGEAREGDKVVNEAIAQIERLASEVVRSTEAMTVLQQESDKIGSV 472

Query: 377 VDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNL 436
           +DVI  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ+ST +I  ++  L
Sbjct: 473 MDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGL 532

Query: 437 QACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVS 496
           Q   Q+     NNSR L +  VE +++   ++E I    S I  M  QIA+A  +Q +V+
Sbjct: 533 QNGTQQVAAVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVA 592

Query: 497 EELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           EE+SR+I  + + ++Q A  S   A S  EL++L +QLQ  V  FR+
Sbjct: 593 EEISRSIINVRDVSEQTAAASDETAASSVELARLGNQLQMMVSHFRV 639