Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  237 bits (605), Expect = 9e-67
 Identities = 154/419 (36%), Positives = 234/419 (55%), Gaps = 22/419 (5%)

Query: 141 EMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISEFS-------- 192
           + I+   D  RS    + LETA   + K      D  + E+  + D++ +F         
Sbjct: 228 QQIRTVLDEYRS--AIQALETATQAIAKARQEMTDQQK-EIVRISDSLYQFQLDRLDVES 284

Query: 193 --------VASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGH 244
                   V++++AL+  + A  WL+T  I  PL   +     IA G+L+     +    
Sbjct: 285 SDARSRLIVSTLLALVLGVLAA-WLITRQIILPLRTTMADVERIASGDLSETAQIQR--R 341

Query: 245 DELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIA 304
           DELG L     +M + LR ++  I    +Q++ A +E+SAV++QTS G+  Q+EE  Q+A
Sbjct: 342 DELGVLQRGIQQMGSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVA 401

Query: 305 TAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVL 364
           TAM EM +TV EVARN E A+ A+ ++   A  G + +  V   I+ +   + R+ + + 
Sbjct: 402 TAMHEMSATVQEVARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMT 461

Query: 365 ELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQ 424
            L+ ++ +I  V++VI  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ+
Sbjct: 462 ALQEESDKIGSVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQK 521

Query: 425 STGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQ 484
           ST +I  ++  LQ   Q+     + SR+L +  VE ++    ++  I    S I  M  Q
Sbjct: 522 STEEIEGLVAALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQ 581

Query: 485 IASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           IA+A  EQ +V+EE+SR++  + + ++Q A  S   A S  EL++L  QLQ  V RFRL
Sbjct: 582 IAAAAEEQSAVAEEISRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFRL 640