Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  235 bits (600), Expect = 4e-66
 Identities = 148/398 (37%), Positives = 236/398 (59%), Gaps = 18/398 (4%)

Query: 149 LQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISEFSVASIVALLAFMSAVT- 207
           L   LPT E ++    EL +L ++  + +RS L  ++          I  L+AF   +  
Sbjct: 327 LMLELPTAEVMK----ELDQLMVALGEESRSNLAAML---------VIGMLIAFAGLLAI 373

Query: 208 WLLTNLICSPLMQVVTQANAIA--EGNLAHRLDRKTIGHDELGELADACSKMQNNLRLMV 265
           WL++  I  PL  +V   + I+  EG+L  RL+  +   +ELG++A   +     L+ M+
Sbjct: 374 WLISRRITRPLRDMVVMLDNISQGEGDLTQRLNIDS--RNELGQIAAGFNAFLARLQGMI 431

Query: 266 EEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVAS 325
            E+++S  +++ A +  + ++ +T +G+Q Q  E+  +ATA+ EM +T  +VARN   A+
Sbjct: 432 SEVVSSVQKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVHEMTATAQDVARNATQAA 491

Query: 326 DASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISNIAE 385
           +A+ ++ + AN G   ++    +I  +  EIGR    V  L   ++ I+ ++  I +IAE
Sbjct: 492 EAANNADRAANQGRHIVQDTGATIAELASEIGRAVDVVQTLARDSENIDAILVTIRSIAE 551

Query: 386 QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARE 445
           QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA KTQQ+TG+I ++IQ LQ   +   +
Sbjct: 552 QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQ 611

Query: 446 TTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIER 505
               S+      VEQ+    +A++ I    S I DM  QIASA  EQ +V+E+++RN+  
Sbjct: 612 VMEQSQNRTRRSVEQADAAAEALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTN 671

Query: 506 INESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           I + A+QVA G+  A+Q+ A L++LA Q +  + +FR+
Sbjct: 672 IGQVAQQVAAGADEASQASAGLTRLAEQQRRLINQFRV 709