Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  247 bits (630), Expect = 1e-69
 Identities = 159/423 (37%), Positives = 237/423 (56%), Gaps = 18/423 (4%)

Query: 135 NDILQKEMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELT---ELIDNISE- 190
           ND  Q  M KA  +L++    F++      E L+L  S    +   +    E + N S  
Sbjct: 230 NDDQQASMDKALAELEQYRAAFDEFRQNRGERLELERSMAQQSEVVIAAADEALANASNA 289

Query: 191 -----------FSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDR 239
                        V   +A+   + A T +++ +I  PL   V QA  +A G+L H    
Sbjct: 290 MQQQQRSSYLLLGVIGALAIFVGLLAAT-VISRMIVGPLRSTVQQAQRVANGDLTH--SE 346

Query: 240 KTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEE 299
            +   DE+G+L +A   M  +LR ++  I    +Q+A A D++SAV+ QTS G+Q Q+ E
Sbjct: 347 ASARRDEVGQLQNAMHGMTQSLRNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQRVE 406

Query: 300 VMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRT 359
             Q+ATAM EM +TV EVARN E AS A+R + Q A  G + ++     I ++  E+ ++
Sbjct: 407 TEQVATAMHEMAATVQEVARNAEQASIAARQADQQARQGDRVVQDAVGQIGNLASEVDQS 466

Query: 360 EQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 419
              +  L +++ +I  V++VI  +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA
Sbjct: 467 AHAIEALHAESGRIGSVLEVIRAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 526

Query: 420 GKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIA 479
            +T  ST +I  +I NLQ  AQ+A E   +SR L    V+ + E   A+ +I    S I 
Sbjct: 527 RRTHDSTEEIEGLIANLQRVAQQAVEQMQSSRSLTQRTVDLANEAGVALGRITESVSTIE 586

Query: 480 DMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQ 539
            M  QIA+A  +Q +V+E +S ++ R+ +   Q A  +   A + AEL++L  +LQ  V+
Sbjct: 587 QMNQQIAAAAEQQSAVAENISESVTRVRDIGDQSASATEQTAGASAELARLGVELQGLVR 646

Query: 540 RFR 542
           +FR
Sbjct: 647 QFR 649