Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  266 bits (681), Expect = 1e-75
 Identities = 177/547 (32%), Positives = 296/547 (54%), Gaps = 19/547 (3%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           +N+ + ++ A+ FG+I LI L  G +    +  I+S+   L+D+ LPS++ +  +  N  
Sbjct: 4   RNMNVSQRSALGFGLIGLIVLLLGLFAILQMGKIRSEAAKLSDEWLPSIVALGDL--NQH 61

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWN 124
           ++R    +L    D   + E+   +     +++     Y+R++    ER +F        
Sbjct: 62  TLRTRIHTLRLIIDRTRVEENRATLARFRNELSSLEDAYQRTVDHPQERELFQ------- 114

Query: 125 EYLRQLGSFNNDILQKEMIKAQQDLQRSLPTF-EKLETAIDELLKL--NLSYVDNNRSEL 181
            Y R   +F+  + +   ++ Q  ++ ++     +L TA   L +    ++  +N +S L
Sbjct: 115 NYQRARTAFDEVLSEIVRLEGQGRIEEAVEVVGSRLNTAGTGLNEAVARMTAFNNEQSAL 174

Query: 182 TE-----LIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHR 236
           +      +  +   + + +IV  +     + W+ T  I  PL Q V+ A  +A G+L   
Sbjct: 175 SAASAAAIFQSSQAWMIGTIVLAVLLTVVLAWIFTRSIVQPLQQAVSIAEVVASGDLTRH 234

Query: 237 LDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQ 296
           +D   +G DE   L  A   MQ  LR  ++ I  S++QLA A ++++ V+E +++GM  Q
Sbjct: 235 ID--IVGRDEPARLLTALRSMQERLRGTIQSISHSSSQLASAAEQLNVVTEDSTRGMNQQ 292

Query: 297 QEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEI 356
             E+ Q ATA+ EM + V EVARN    S+ASRDS   A  G  Q+    DSI  +  ++
Sbjct: 293 SHEIEQAATAVNEMTAAVDEVARNAVATSEASRDSDATAQHGRNQVIRTVDSIGQLAGDV 352

Query: 357 GRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 416
            +T   V  L +Q + I+ V+DVI +IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR
Sbjct: 353 TQTSAEVERLAAQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVR 412

Query: 417 SLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSS 476
           +LA +TQQST +I ++I ++     +A +    S E     ++ ++   +A+E+I    S
Sbjct: 413 ALAHRTQQSTQEIEQMIGDVHQGTDRAVQAMQVSNERARTTLDLARAAGEALEEIAAAIS 472

Query: 477 QIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQD 536
           QI++  + IASA  EQ  V+ E+ RN+  I + + Q + G+S ++ +  EL++LA  L  
Sbjct: 473 QISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGASQSSAASQELARLAVGLNG 532

Query: 537 TVQRFRL 543
            V  FR+
Sbjct: 533 LVGGFRV 539