Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  254 bits (650), Expect = 4e-72
 Identities = 178/547 (32%), Positives = 291/547 (53%), Gaps = 16/547 (2%)

Query: 4   FKNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNM 63
           F+ + I  +  + F V+AL+    G +    +  ++ D   +    LP++ L+  +    
Sbjct: 2   FRQMRIALRAGLGFAVVALLVFLLGVFALTRIAAMEGDAEKVDQRLLPTIQLLGQVNQEF 61

Query: 64  SSVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLW 123
             +R + + LL S + AE +     ++   + +AQ+    +R I     +++       +
Sbjct: 62  LMIRASTLRLLIS-EPAERSRGAETLDGLRKTLAQERQDLDRLIQDTEGKALLAN----F 116

Query: 124 NEYLRQLGSFNNDI----LQKEMIKAQQDLQRSLPTFEKLET-AIDELLKLNLSYVDNNR 178
           ++ L +  SF   I    LQ  M +A +  +  L    +  + A+ +L+ LN +  +   
Sbjct: 117 DQSLARYESFQRRIVELALQNRMEEAIEITRGELNEHARSTSKAVYDLIGLNRNAANAAS 176

Query: 179 SELTELIDNISEFSVASIVALLAFMSAV--TWLLTNLICSPLMQVVTQANAIAEGNLAHR 236
           +   E+    S F    +  +LAF++ +    LLT  I  PL + V  A  IA G+L   
Sbjct: 177 AHALEVA--ASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGGDLTRH 234

Query: 237 LDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQ 296
              + +G DE   L  A   MQ +LR  ++ I  S+ QLA A +E++ V+E +++G+  Q
Sbjct: 235 F--QVVGSDEPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQ 292

Query: 297 QEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEI 356
             E+ Q ATA+ EM + V EVARN    S+ASR+S + A  G QQ+    DSI  +  ++
Sbjct: 293 NHEIEQAATAVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDV 352

Query: 357 GRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 416
            +T   V  L  Q + I+ V+DVI +IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR
Sbjct: 353 TQTATEVERLAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVR 412

Query: 417 SLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSS 476
           +LA +TQQST +I ++I ++     KA      S E     +E ++   +A++ I    S
Sbjct: 413 ALAHRTQQSTQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAIS 472

Query: 477 QIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQD 536
           QI++  + IASA  EQ  V+ E+ RN+  I + + Q + G++  + +  EL++LA  L +
Sbjct: 473 QISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNN 532

Query: 537 TVQRFRL 543
            V RF++
Sbjct: 533 LVARFQV 539