Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  202 bits (513), Expect = 4e-56
 Identities = 137/412 (33%), Positives = 226/412 (54%), Gaps = 23/412 (5%)

Query: 132 SFNNDILQKEMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNNRSELTELIDNISEF 191
           S   +++   + KAQ ++Q +L    +L T  D L+               E++  I+  
Sbjct: 286 SARGNVVVSGLYKAQDEIQTALQN--ELNTRYDALVLQR------------EVV--IAMC 329

Query: 192 SVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELA 251
            +  ++ L AF S    L   L    L+ V  +   + EG+L+ R+    +  DE+ ++A
Sbjct: 330 VIMGLLLLYAFCSIYRAL--RLTIDSLLGVTRR---LGEGDLSARV--AVVSKDEVADIA 382

Query: 252 DACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMK 311
           +  + M +     +  +  ++ +L      + A      Q M  QQ E  Q+ATA+ EM 
Sbjct: 383 NGLNLMADAFASSISHMDRTSYELTDVASRLGASIGLAKQSMNAQQAETEQVATAINEMT 442

Query: 312 STVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQ 371
           ++VA+VA+NTE A+ A+ +++  +  G + M   + +IQ + +E+  + Q+V  L   +Q
Sbjct: 443 ASVADVAQNTEGAALAADEANTASRNGLRIMHQAHSTIQALAEEVELSAQKVQALALHSQ 502

Query: 372 QINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVE 431
            I  V+ VIS IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ ST +I  
Sbjct: 503 SIGGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTEEIRG 562

Query: 432 IIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGE 491
           IIQ LQ+    A +     ++  + C+  + +   ++  I     +I +M  QIASA  +
Sbjct: 563 IIQQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSISQGVERIVEMNTQIASAAVQ 622

Query: 492 QDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           Q +VSE+++RN+  I  S+  +  G  + A +  EL+++AS +++ V RF+L
Sbjct: 623 QHAVSEDINRNVMEIRNSSGTLMLGIDNNAVTADELARVASDMRNVVARFKL 674