Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  268 bits (684), Expect = 5e-76
 Identities = 185/548 (33%), Positives = 288/548 (52%), Gaps = 19/548 (3%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           + L I ++  + F +I+L+    G +    + TI+   + +  + LPSM +VN I+  M 
Sbjct: 4   RKLTIARRAGLGFTLISLLVALLGWFALAQMSTIRQSEVAVETNWLPSMRVVNDIREIML 63

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWN 124
            +R   + +   TD A I      M+     + + LS  +  + T  E+S       L +
Sbjct: 64  RIRTISLRMALDTDPASIPTYRGQMDVRLGDLDKKLSVLKTFVDTPEEKS-------LTD 116

Query: 125 EYLRQLGSFNNDILQKEMIKAQQD--------LQRSLPTFEKLETAIDELLKLNLSYVDN 176
           +++  +G + + + +   + +Q D        L       +     + +L    L+ VD 
Sbjct: 117 QFMVTVGQYRSALDRSFALASQGDSVGLNKLLLVDMKQIVDGSGKQLGDLADFYLTQVDA 176

Query: 177 NRSELTELIDNISEFSVASIV-ALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAH 235
                    D   +  +  +V A L  +    WL T  I  PL + VT A  +A G+L H
Sbjct: 177 EGKSAGAQYDKSRDIVIIFVVIAALCTIGLALWL-TRSIVGPLQRAVTAAEQVANGDLTH 235

Query: 236 RLDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQI 295
            ++    G DE+  L  A + MQ NLR  +  I +SATQLA A  E+++V+E + +G+  
Sbjct: 236 TIE--VDGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQ 293

Query: 296 QQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQE 355
           Q  E+ Q ATA+ EM S V EVARN    SDAS  SS  A  G  ++     SIQ +   
Sbjct: 294 QNAEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDN 353

Query: 356 IGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 415
           +  T   V  L +Q+Q I  V+DVI +IAEQTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 354 VQATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEV 413

Query: 416 RSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQS 475
           R+LA +TQQST +I  ++  +++ + +A ++ N SR   +  +  ++   +++ +I    
Sbjct: 414 RALAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSI 473

Query: 476 SQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQ 535
           +QI++  + IASA  EQ  VS E+ RNI  I + + Q  QG++  + S  ELS+LA+ L 
Sbjct: 474 NQISERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLN 533

Query: 536 DTVQRFRL 543
             V RF++
Sbjct: 534 QVVSRFKV 541