Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  239 bits (610), Expect = 2e-67
 Identities = 167/544 (30%), Positives = 280/544 (51%), Gaps = 11/544 (2%)

Query: 5   KNLAIGKKIAVAFGVIALINLAFGGYLYNSLHTIKSDVLNLTDDTLPSMMLVNGIKYNMS 64
           +N+ +  +  ++F +I  + +A GG     +  +++ + +L  D + S++  N I     
Sbjct: 2   RNVKVAVRAGMSFMLITCLLIALGGIALWKMGELRASMESLEKDAMASIIQANKISSATL 61

Query: 65  SVRRAQISLLSSTDEAEIAEDIRWMNDHYQQIAQDLSRYERSIWTDHERSIFMPVKNLWN 124
            +R     L++ TD       +  +    + + +  + Y        E S++  V     
Sbjct: 62  RLRLDARRLIAQTDPQAQTITVTRLKAAREDMLKQSAAYAPLASAADEASLYQTV----T 117

Query: 125 EYLRQLGSFNNDILQKEMIKAQQDL-----QRSLPTFEKLETAIDELLKLNLSYVDNNRS 179
              ++  S  + +L+     A  D         +P   +L+TAID L+++N+   D    
Sbjct: 118 ASAQKFASLLDTVLELIQKGANADAVTFTDTNIVPVTGELQTAIDALVQMNIDQADQLSV 177

Query: 180 ELTELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDR 239
                 ++   F+V  I+  L     +  LLT  I +PL  +++    IA G+L  R D 
Sbjct: 178 RAEAAYESGFMFTVVIIIVSLIITIFLAILLTRSIVTPLKSLLSVNERIASGDL--RGDI 235

Query: 240 KTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEE 299
              G DE  EL  A   MQ NLR  +  I  S+ QLA A +E++ ++ Q+S G+  Q +E
Sbjct: 236 PVTGDDEFSELQRATLAMQKNLRQTIGLIGNSSQQLASAAEEMNCITVQSSTGLGRQNQE 295

Query: 300 VMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRT 359
           + Q ATA+ EM + V EVARN   ASDA+++S+     G++++ +   +I+ ++  +  T
Sbjct: 296 IEQAATAVNEMTAAVDEVARNAAAASDAAKESNASTVRGAERVASTVTAIEKLSATVLAT 355

Query: 360 EQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 419
              V  L  Q+  I+ V+ VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA
Sbjct: 356 SADVQRLAGQSNDISKVLAVIRTIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 415

Query: 420 GKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIA 479
            +TQQST +I ++I  +   +++A  +   S       +  + E   A++ I  +  +I 
Sbjct: 416 HRTQQSTQEIEQMIGAVLEGSEQATRSMQESCMGAQDTLGVAHEAGAALDDIARRIEEIN 475

Query: 480 DMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQ 539
           DM   IA+A  EQ  V+  +  N+  I + + Q  +G++  + +  ELS+LA ++   V 
Sbjct: 476 DMNTLIATASEEQAQVARSIDHNLISIRDLSVQSTEGANQTSLASGELSRLAIEMNGVVT 535

Query: 540 RFRL 543
           RF++
Sbjct: 536 RFKM 539