Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  243 bits (620), Expect = 2e-68
 Identities = 154/391 (39%), Positives = 230/391 (58%), Gaps = 13/391 (3%)

Query: 160 ETAIDELLKLNLSYVDNNRSELT---ELIDNISEFSVASIVALLAFMSAV----TWLLTN 212
           + A+D++  L +S +  +   +T   +  D  S  SV  I+A  A    +     W++T 
Sbjct: 250 KAALDKMTTLGVSMLATSNDLITRQNKSRDADSAKSVQMIIAATALAMVLGILAAWVITR 309

Query: 213 LICSPLMQVVTQANAIAEGNLAHRL--DRKTIGHDELGELADACSKMQNNLRLMVEEIIT 270
            I +PL + +     +A G+L+  L  DRK    DELG+L     +M  +LR +V  I  
Sbjct: 310 QITTPLQETLEVVERVASGDLSRNLNVDRK----DELGKLQATIQRMTVSLRELVGGIRD 365

Query: 271 SATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRD 330
             TQ+A A +E+SAV+EQTS G+  Q+ E  Q+ATAM EM +TV EVARN E AS+A+  
Sbjct: 366 GVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASEAAVA 425

Query: 331 SSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLL 390
           + + A  G + +      I+ +   +G + + +  L+ ++ +I  V+DVI ++AEQTNLL
Sbjct: 426 ADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQTNLL 485

Query: 391 ALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNS 450
           ALNAAIEAARAGE GRGFAVVADEVRSLA +TQ+ST +I  +I  LQ+  Q+A    ++S
Sbjct: 486 ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSS 545

Query: 451 RELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIERINESA 510
           REL    VE ++    ++  I    S I  M  QIA+A  EQ + +EE++R+I  + + +
Sbjct: 546 RELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVS 605

Query: 511 KQVAQGSSSAAQSCAELSQLASQLQDTVQRF 541
           +Q +  S   A S  EL++L + LQ  V RF
Sbjct: 606 EQTSAASEETAASSVELARLGNHLQVLVSRF 636