Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  248 bits (634), Expect = 4e-70
 Identities = 161/426 (37%), Positives = 243/426 (57%), Gaps = 14/426 (3%)

Query: 118 PVKNLWNEYLRQLGSFNNDILQKEMIKAQQDLQRSLPTFEKLETAIDELLKLNLSYVDNN 177
           P       Y  +LG F     + E   A Q++   L      ET +D +  LN       
Sbjct: 235 PATAALQSYRERLGEFKQIQTKAE---ADQEIMEGLG-----ETLLDSVGALNHLQTAQR 286

Query: 178 RSELTELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRL 237
            SE       +S  SVA +  L+  ++A  W++T  I  PL Q ++ A  IA+G+L+   
Sbjct: 287 DSEAANSSAMLS--SVAGLALLIGLLAA--WIMTRQITVPLQQTLSAAARIAQGDLSR-- 340

Query: 238 DRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQ 297
           D      DE+G+L  +   M  +LR +V  I    +Q+A A +++SAV++QT  G+  Q+
Sbjct: 341 DISVTRRDEMGQLQGSMQTMTVSLRELVGGISEGVSQIASAAEQLSAVTKQTCIGVTSQK 400

Query: 298 EEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIG 357
           +E  Q+ATAM EM +TV EVARN + AS A+  + Q A  G + +      I+ + +E+ 
Sbjct: 401 DETDQVATAMNEMAATVQEVARNAQEASQAAAQADQQARSGDEVVGQAITQIEQLAREVL 460

Query: 358 RTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRS 417
            + Q +  L+ ++ +I  V+DVI ++++QTNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 461 NSTQSMSALKQESNKIVGVLDVIKSVSQQTNLLALNAAIEAARAGEAGRGFAVVADEVRG 520

Query: 418 LAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQ 477
           LA +TQ+ST +I E+I  LQ   Q+   T ++SR L ++ VE S+    A+EQI    + 
Sbjct: 521 LAQRTQKSTEEIEELIAALQTGTQQVATTLDSSRTLTDNTVELSRRAGGALEQITRTVAT 580

Query: 478 IADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDT 537
           I  M  QIA+A  EQ  V+E+++RN+  + + ++Q A  S   A S  EL++L + LQ  
Sbjct: 581 IQHMNEQIATASEEQSVVAEQINRNVISVRDISEQTAAASEQTAASSVELARLGTHLQTL 640

Query: 538 VQRFRL 543
           V +FR+
Sbjct: 641 VGKFRV 646