Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  215 bits (548), Expect = 3e-60
 Identities = 135/392 (34%), Positives = 218/392 (55%), Gaps = 18/392 (4%)

Query: 157 EKLETAIDELLKLNLSYVDNNRSELTELIDNISEFSVASIVALLAFMSAVTWLLTNLICS 216
           ++ E A  EL +L L  + +   +           SVA    L A ++ +  ++T +I  
Sbjct: 242 DQSEQATQELRELALHEIHDEEGD-----------SVAMATTLFAVIAVLVAIVTFMIIR 290

Query: 217 PLMQVVTQANAIA-----EGNLAHRLDRKTIGHDELGELADACSKMQNNLRLMVEEIITS 271
            ++  +   N +      + NL  R D  T G DE+ E+    ++M  + R +++++  +
Sbjct: 291 AIITPINNINQVISHVGKDKNLTLRCD--TQGGDEIAEIGQHFNEMVESFRALIQQVNDA 348

Query: 272 ATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDS 331
              +  +  E+SA + Q S G+  Q  E   +ATA+ EM +T+ E+A+NTE+A++ +  +
Sbjct: 349 VNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHT 408

Query: 332 SQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLA 391
             +A VG Q +    + IQ + Q++  +   V ELE  +  I  V+DVI  IAEQTNLLA
Sbjct: 409 HTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLA 468

Query: 392 LNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSR 451
           LNAAIEAARAGEQGRGFAVVADEVRSLA +TQ+ST +I  IIQ LQ+  +   +    S+
Sbjct: 469 LNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQ 528

Query: 452 ELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIERINESAK 511
                  EQ+      + QI    + I DM+ QIA+A  EQ SV+ E+++N+  I + A+
Sbjct: 529 RQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAE 588

Query: 512 QVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           + +  + + A++  ++ + A  LQ  V +FR+
Sbjct: 589 ESSHAAMANAKASDDVRERAEYLQRAVSQFRV 620