Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  243 bits (620), Expect = 2e-68
 Identities = 155/420 (36%), Positives = 248/420 (59%), Gaps = 18/420 (4%)

Query: 135 NDILQKEMIKAQQDLQRS--LPTFEKLETAIDELL-KLNLSYVDNNRSELTELIDNISEF 191
           + IL+++  +   +LQ S  L T E   TA+++ +  LN +    +++   + ID I   
Sbjct: 262 DSILKRKGQQLDFNLQASQLLNTVESNATAVNQSMGSLNKAIESTSQAVSVKAIDEIDSA 321

Query: 192 SVASIVALLAFMSAVTWLLTNLICSPLM----QVVTQANAIAEGNLAHRLDRKTIGHDEL 247
           S  ++ AL+     V  L++  +  PL     +V    N +A GNL H+LD    GHDE 
Sbjct: 322 SYKTL-ALVLIAIVVAVLVSIAVIRPLKNSLDKVNNALNILASGNLTHKLDDS--GHDEF 378

Query: 248 GELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAM 307
            EL+  C+++ ++LR +++ I+  + QLA A +E SA++ QT+ G+Q Q+ +V Q+ATA 
Sbjct: 379 AELSRNCNRLVDSLRTLIQGILDRSNQLAAAAEETSAITAQTTAGIQEQKNQVDQVATAT 438

Query: 308 AEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVND----SIQHVNQEIGRTEQRV 363
            ++ S+  +V+ + + A +  R + + A    Q MRA+ D    +I  +  E+ +  Q +
Sbjct: 439 TQLSSSAMQVSTSADEALNQIRQADEEA----QHMRAIADENKRTILALADEVAKAGQVI 494

Query: 364 LELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQ 423
            ++ S +  I  ++DVI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA +TQ
Sbjct: 495 NKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQ 554

Query: 424 QSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTI 483
            ST +I ++IQ LQ   Q+A       R+  N CVE++++   A+E I +      D   
Sbjct: 555 DSTQEIQQMIQVLQQGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYAHDSGT 614

Query: 484 QIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
            IA+A  EQ+ VS+++S  +E I   +++ A G+   AQS  +++QLA +LQ +V  F++
Sbjct: 615 HIANAAQEQNLVSQQVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQASVGEFKV 674