Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  229 bits (585), Expect = 2e-64
 Identities = 151/439 (34%), Positives = 252/439 (57%), Gaps = 33/439 (7%)

Query: 130 LGSFNNDILQKEMIKAQQD--LQRSLPTFEKLETAIDEL--LKLNLSYVDNNRSELTELI 185
           L S N D+ +   +    D  +Q+        + A ++L  ++ ++  +D N  E+++ I
Sbjct: 243 LESINQDVKKVLTLLEGSDSMVQQKANQLNHAQAASNQLAIIEKDVKVIDRNMEEVSDNI 302

Query: 186 D---------NISEFSVAS----IVALLAFMSAVTWLLTNLICSPLMQVVTQAN----AI 228
           +          I++   AS    IV L+A + A+  +++  + +PL + + Q N     +
Sbjct: 303 EAVAAQMSQATITQIDAASFRTMIVVLIAIVVAI--IISFAVVTPLKRSLNQVNNALNVL 360

Query: 229 AEGNLAHRLDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQ 288
           A GNL H+LD  +   DE  ELA  C+++ ++LR ++  I+  + QLA A ++ SA++ Q
Sbjct: 361 ASGNLTHKLDDSS--QDEFAELAKNCNRLVDSLRGLIAGILDRSNQLAAAAEQTSAITAQ 418

Query: 289 TSQGMQIQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDS 348
           T+ G+Q Q+ +V Q+ATA  E+ S+  +V+ +   A    + + Q A    + MRA+ + 
Sbjct: 419 TTTGIQEQKSQVDQVATATTELSSSAQQVSMSANDALAQIKQADQEA----KHMRAIAEE 474

Query: 349 IQH----VNQEIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQ 404
            +H    + +E+ +  Q + ++ S +  I  ++DVI  IAEQTNLLALNAAIEAARAGEQ
Sbjct: 475 NKHTILALAEEVAKAGQVINKVHSDSAAIGSILDVIRGIAEQTNLLALNAAIEAARAGEQ 534

Query: 405 GRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQET 464
           GRGFAVVADEVRSLA +TQ ST +I ++I+ LQ  AQ+A    +  R   N CV+++++ 
Sbjct: 535 GRGFAVVADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACVQKTEQA 594

Query: 465 QQAIEQIRHQSSQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSC 524
             A+E I     +  D    IA A  EQ+ VS+++S  +E I   +++ A G+   AQS 
Sbjct: 595 NLALETISQSVHKAYDAGTHIAHAAQEQNLVSQQVSEKLEHIAAISEETAIGADQTAQSS 654

Query: 525 AELSQLASQLQDTVQRFRL 543
            ++++LA +LQ +V  FR+
Sbjct: 655 HQVAKLAEELQASVGEFRV 673