Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  217 bits (553), Expect = 9e-61
 Identities = 136/369 (36%), Positives = 207/369 (56%), Gaps = 3/369 (0%)

Query: 177 NRSELTELIDNISEFSVASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGN--LA 234
           N+ E+     +++ +  A  V LL     V   +  +    L +V    N IAEG+  L 
Sbjct: 263 NKQEIMSQATSLAWWMSAVGVGLLVIFGLVLVAIFKMQFKDLERVALALNDIAEGDGDLT 322

Query: 235 HRLDRKTIGHDELGELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQ 294
            R+      HDE+G LA   ++    L  M+  +   A QL +     SA +   SQ ++
Sbjct: 323 VRIHTAN-SHDEIGILASGFNRFVERLHGMISRMHNIAGQLEYQAKGSSASAADNSQRIE 381

Query: 295 IQQEEVMQIATAMAEMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQ 354
           +QQ+EV  +ATA+ EM S   E+A N E  +  ++++   +N G +Q+     SI+++  
Sbjct: 382 VQQDEVTMVATAVTEMASATEEIASNAEHTAQTAQNAVSLSNHGQKQVMQSQQSIRNLAN 441

Query: 355 EIGRTEQRVLELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 414
           E+    + + EL   +Q+IN ++  IS IAEQTNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 442 EVDTAGRIISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 501

Query: 415 VRSLAGKTQQSTGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQ 474
           VR L+ +T  ST +I  +I+ LQ  A KA ++   S ++    V  +    +++ QI   
Sbjct: 502 VRVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKA 561

Query: 475 SSQIADMTIQIASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQL 534
            ++I+DM  QIA+A  EQ SV+ E++RN E I E ++ ++  + SA     EL+ LA+ L
Sbjct: 562 INEISDMASQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSAMVQSQELAHLAASL 621

Query: 535 QDTVQRFRL 543
           Q  V RF+L
Sbjct: 622 QQEVSRFKL 630