Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  235 bits (600), Expect = 4e-66
 Identities = 155/419 (36%), Positives = 244/419 (58%), Gaps = 22/419 (5%)

Query: 137 ILQKEMIKAQQDLQRSLPTFEKLETAID---ELLKLNLSYVDNNRSELTELIDNISEFSV 193
           +L+   +   +     L T EK    ID   E +  N+  V  N S+  E I  I   S+
Sbjct: 265 LLKATQLNHAKSAMNQLATIEKDVKVIDRNMEDVSNNIESVAANMSQ--ETIAKIDAASI 322

Query: 194 ASI-VALLAFMSAVTWLLTNLICSPLM----QVVTQANAIAEGNLAHRLDRKTIGHDELG 248
            +I V L+A ++AV  +++  + +PL     QV    N +A GNL H+LD    GHDE  
Sbjct: 323 RTIIVVLIAIVAAV--IISFAVVAPLKRSLYQVNNALNVLASGNLTHKLDDS--GHDEFA 378

Query: 249 ELADACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMA 308
           ELA  C+++ ++LR ++  I+  + QLA A ++ SA++ QT+ G+Q Q+ +V Q+ATA  
Sbjct: 379 ELAKNCNRLVDSLRGLIVGILDRSNQLAAAAEQTSAITAQTTSGIQEQKSQVDQVATATT 438

Query: 309 EMKSTVAEVARNTEVASDASRDSSQHANVGSQQMRAVND----SIQHVNQEIGRTEQRVL 364
           E+ S+  +V+ + + A    + + Q A    + MR + +    +I  +  E+ +  Q + 
Sbjct: 439 ELSSSAQQVSMSADDALAQIKQADQEA----KHMRTIAEENKRTILALADEVAKAGQVIN 494

Query: 365 ELESQAQQINMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQ 424
           +++S +  I  ++DVI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA +TQ 
Sbjct: 495 KVQSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQV 554

Query: 425 STGDIVEIIQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQ 484
           ST +I ++I+ LQ  AQ+A    +  R   N CV+++++   A+E I     +  D    
Sbjct: 555 STREIQQMIEVLQQGAQQAVAAMDMGRAQANACVDKTEQANLALETISQSVHKAYDAGTH 614

Query: 485 IASACGEQDSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           IA A  EQ+ VS+++S  +E I   +++ A G+   AQS  ++++LA +LQ +V  FR+
Sbjct: 615 IAHAAQEQNVVSQQVSEKLEHIAAISEETAIGADQTAQSSHQVAKLAEELQASVGEFRV 673