Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  230 bits (586), Expect = 1e-64
 Identities = 133/345 (38%), Positives = 211/345 (61%), Gaps = 2/345 (0%)

Query: 199 LLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELADACSKMQ 258
           L+  M+A+ ++++  I  PL QV      IA GNL  +L     G DEL  LA   ++  
Sbjct: 191 LILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQL--AVTGKDELAALAHNINQSM 248

Query: 259 NNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKSTVAEVA 318
            ++R  + E   SA  ++ A   +++ +E+T+Q +  Q++++ Q+ATAM EM +T+A+VA
Sbjct: 249 ASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIADVA 308

Query: 319 RNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQINMVVD 378
            N E  +  ++++++ A +G + + A  D I  + +E+ +  Q+V +L+ +  QI+ V  
Sbjct: 309 NNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEVTA 368

Query: 379 VISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEIIQNLQA 438
           VIS I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T+QST +I   I  LQ 
Sbjct: 369 VISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQNTISLLQQ 428

Query: 439 CAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQDSVSEE 498
            A  A    + SR+L    V+QS +    +  I      ++DM  QIA+A  EQ +V+EE
Sbjct: 429 RAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAEEQSAVAEE 488

Query: 499 LSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFRL 543
           ++RN+  IN SA +V++ ++  AQ    L++L+  L + +  F+L
Sbjct: 489 MNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL 533