Pairwise Alignments

Query, 656 a.a., glycogen debranching enzyme GlgX from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., glycogen operon protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  452 bits (1162), Expect = e-131
 Identities = 256/644 (39%), Positives = 358/644 (55%), Gaps = 63/644 (9%)

Query: 9   FPLGATLDAEGCNFAIYAPANRDILLALFHADGSYETHQ--LEHEYAGVKHTHISGIHAG 66
           FPLGAT+D  G NFA+++     + L LF A G  E  +  L  +   + H ++ G+ AG
Sbjct: 23  FPLGATVDDGGVNFALFSAHATGVELCLFDAQGKVEIQRIALTEQTQQIWHLYVHGLCAG 82

Query: 67  QKYGYLI------QLNDELH---YISDPYARALEGPLHYA----------PPFD-SHKSF 106
           Q YGY +      QL    +    + DPYAR L G  H+           P  D S  + 
Sbjct: 83  QLYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGRYHHHIANFGYELDNPNEDLSFSTL 142

Query: 107 D----LPKCVVTDTHFDWQNVAKPRIAR-----------DEMVLFETHVKGLTQLNPDVE 151
           D    +PKC V D        A+ +  R           ++ +++E H+KG T L+P+++
Sbjct: 143 DNAAYMPKCKVVDIR-PLLAAAESQAIRPLSPHRNPLPIEQCIIYEMHLKGFTALHPEID 201

Query: 152 KALRGKYLGLVSQPMLDFYRQQNINTLQLLPIAACMHEPHLLESGKVNYWGYNPYVFMAP 211
             LRG + GL S+  +D+  +  +N ++LLPI A   EP LLE    NYWGYN   F AP
Sbjct: 202 VPLRGTFAGLASKAAIDYLVKLGVNCVELLPIQAFFSEPFLLEKQLSNYWGYNSIGFFAP 261

Query: 212 DPRYASKDAVNELKTTIRELHRNGIQVILDVVYNHTAEGGTNGPVFNLKALDP-NYY-LH 269
           +P Y S + + E +T +  LH  GI+VILDVVYNH+AEG   GP F+ + +D  +YY LH
Sbjct: 262 EPSYLSSEDIIEFRTMVDALHGAGIEVILDVVYNHSAEGSRLGPTFSFRGIDNLSYYRLH 321

Query: 270 HGDH--YANYTGCGNTVDLSNQAALNLVMDTLRCWVTEYQIDGFRFDLAATLGRRGDEFS 327
             D   Y N TGCGNT++L++   L LV+D+LR WV    +DGFRFDLAA+LGR    F 
Sbjct: 322 PNDKRFYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVMGVDGFRFDLAASLGREAYGFD 381

Query: 328 KEAAFFKAVAQDPVLREVKLIAEPWDIGPNGYQVGNFPFGWNETNDKLRDITRSFWRGDL 387
             + FF A+ QDPVL  VKLIAEPWDIGP GYQ+GNFP  ++E ND+ RD  R FWRGD 
Sbjct: 382 PGSGFFDALLQDPVLCRVKLIAEPWDIGPGGYQLGNFPVAFSEWNDRYRDTMRRFWRGDH 441

Query: 388 GFLKEFATRLMGSRDLYSAANWPYKLTVNYITYHDGFTLQDLVSYKHKHNEANGEQNRDG 447
           G L EFA R  GS D +  +  P   ++N++T HDGFTL+DLVSY  +HN ANGE+NRDG
Sbjct: 442 GMLPEFARRFHGSGDFFEHSGRPPAASINFLTSHDGFTLKDLVSYCERHNWANGEENRDG 501

Query: 448 HGDNRSDNYGFEGDTDSIVIRATRERQKRNFMASLLFAFGIPHILTADVLSHTQKGNNNA 507
           H  N S +YG EG ++ + +   R RQ+RN + +L  + G+P +L+ D    TQ GNNNA
Sbjct: 502 HHANFSYHYGVEGASNDVSVLVLRARQQRNLLTTLFLSQGVPMLLSGDETGRTQGGNNNA 561

Query: 508 YCQDNDISWLNWENNETKQDFREWLAGMVAARQTYMVPFIRAFSGE-------------- 553
           YCQDN ++W +W +    +    +   ++A R+ + +   + F  E              
Sbjct: 562 YCQDNPMNWFDWSSEGMDKHLLSFTQQLIALRKRFPLLCAKRFIHEQLVARSLESPSESP 621

Query: 554 -------NRNNNRIAWRRVDGKPMEMDDWNRLSSVALHIGIGSD 590
                   + + R+ W    GKPM    W+     +L + +  D
Sbjct: 622 LGAAKFLTQPSARLDWFSRQGKPMTKSLWSESMCRSLCVVLSGD 665