Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Porin, LamB type from Pseudomonas syringae pv. syringae B728a

 Score = 77.4 bits (189), Expect = 9e-19
 Identities = 117/435 (26%), Positives = 172/435 (39%), Gaps = 71/435 (16%)

Query: 29  FNGYFRAGTGIS---GNGNADQAVNKAGT-----GRLGNENDNYYEFGFAEELKTGEQT- 79
           F GY R+G  I+   G G        AG+     GRLGNE+D Y  F  ++E+     T 
Sbjct: 115 FKGYARSGLLINDGLGGGRGGPYTTPAGSVGGAVGRLGNEDDTYMRFDLSKEIYAQNGTR 174

Query: 80  WKVESMIAQGNSGANGW--EDGDFNVAQFNVQAKGLLASD-----QEAVMWAGKRYYQRK 132
            K    IA G    N W   +   NV Q   +   + A       + + +WAGKR+ +  
Sbjct: 175 SKFTVSIADGVESYNDWTPTESSLNVRQVFTELDHIAAFKGNSVFENSTLWAGKRFDRDN 234

Query: 133 -DIHITDFYFLNTSGTGGGIENLSVGNQ-KLSVALVQDGDNTNSSGYIFDARLANIGLWE 190
            DIH  D   +  +GTGGGI ++ +    + + +L+       S G + DA + +  L  
Sbjct: 235 FDIHWLDSDVVFLAGTGGGIYDVQMTRDWRSNYSLIGRNYGDFSEGGV-DADVESYILTS 293

Query: 191 NASLELAM-AYNFATEKDSKNEV-----------ADDGVLVSAILHQG---LSNGFNQTV 235
           N   +     + F      KN+V           AD G+      HQ       GF +T 
Sbjct: 294 NQFFDNGQWQWMFNAIGARKNDVGTRTNQAGFAPADSGLHTMLANHQKDFFGREGFFKTA 353

Query: 236 FQYGTAGYGAQAANFWGAGSYYARGTEAFNDASGFRLLNWGVINLGENWEMGHQLAYLAG 295
             YG  G GAQ  +    G       E  +DA   RL  +G   +   W +G  L  LA 
Sbjct: 354 LLYG-QGLGAQVKDIGADG-------ELLDDARAVRLAMYGETPIAPGWRIGPSL--LAE 403

Query: 296 SDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGYNAGEKISNGGL 355
                       +K+ Y  K  D    ++ +R   + N      +E  +   +    G L
Sbjct: 404 Q-----------SKDRYV-KGDDYRWLTLNMRLANEINSNFEMAYELSWQTMDLDPKGYL 451

Query: 356 ATE--DFGNAKFTVAQAWA--MGDSFWARPELRVYGTYL-----LDTENDKA-FGDDDTE 405
                D    KFTVA  +   MGD    RPELRV+ + +     LD  +    FG  D  
Sbjct: 452 QRNAVDGNFWKFTVAPTFKPDMGD-LLTRPELRVFASLMNWSSDLDRYSTTGNFGKSDFN 510

Query: 406 ----FVVGIQVEAWW 416
               + +GIQ+E W+
Sbjct: 511 SGGVWQLGIQMETWF 525