Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., porin, LamB type from Marinobacter adhaerens HP15

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 103/432 (23%), Positives = 167/432 (38%), Gaps = 65/432 (15%)

Query: 29  FNGYFRAGTGISGNGNADQA---VNKAGT-----GRLGNENDNYYE--FGFAEELKTGEQ 78
           FN Y R+G  ++G+  +      +  AG+     GRLGNE D Y E    + +  + G +
Sbjct: 72  FNTYARSGLLLNGDLQSAPGGPYLTPAGSVGGAVGRLGNEPDTYLEAILNYKQVAENGTK 131

Query: 79  TWKVESMIAQGNSGANGWE--DGDFNVAQFNVQAKGLLASD---QEAVMWAGKRYYQ--R 131
           +     MIA   + +N W   DG  NV Q  V+   L +      +A +WAGKR+ +   
Sbjct: 132 S-HYRLMIADSTTSSNDWTAGDGALNVRQAYVEFSNLASFSGIFDDAAIWAGKRFDRDLN 190

Query: 132 KDIHITDFYFLNTSGTGGGIENLSVGNQ-KLSVAL-----------VQDGDNTNSSGYIF 179
            DIH  D   +   G G G+ +++  +  K + +L           +QD D T  +  + 
Sbjct: 191 FDIHWLDSDIVFLGGLGAGVYDVTFSDSLKSNFSLYGRSFLEFPSDIQDQDITADTDNLI 250

Query: 180 DARLANIGLWENASLELAMAYNFATEKDSKNEVADDGVLVSAILHQ----GLSNGFNQTV 235
                  G  +     +    N         E A+ G+      H     G+S+G  +  
Sbjct: 251 LTANNYFGNVQWLINGMKAQENDLRVVGGVTEAAETGLHTMLAYHGDSFFGISDGSFKAA 310

Query: 236 FQYGTAGYGAQAANFWGAGSYYARGTEAFNDASGFRLLNWGVINLGENWEMGHQLAYLAG 295
             +GT G GA+  N    G  +        DA   R+  +G   L E W      A LA 
Sbjct: 311 IIHGT-GLGAETKNIGADGDLH-------EDAVSTRVAVYGTTYLSETWRFAP--AILAE 360

Query: 296 SDIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGYNAGEKISNGGL 355
           +       GD     T+  +     + S      Y+ +     +   GY +   +     
Sbjct: 361 TSEDRYIKGDEYQWLTFNARV--AQELSANFEMQYEASWQTMDLTTLGYQSRNSV----- 413

Query: 356 ATEDFGNAKFTVAQAW-AMGDSFWARPELRVYGTYLL--DTENDKAFGD--------DDT 404
              D   ++FTVA  +      FW RPE+RV+ +Y    D     A GD        + +
Sbjct: 414 ---DGDYSRFTVAPTFKPQVGGFWNRPEIRVFASYSTWDDELETYASGDALGVDSDFESS 470

Query: 405 EFVVGIQVEAWW 416
           ++  G Q+E W+
Sbjct: 471 QWTFGTQMEIWF 482