Pairwise Alignments

Query, 416 a.a., maltoporin from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., LamB type porin from Klebsiella michiganensis M5al

 Score =  116 bits (290), Expect = 2e-30
 Identities = 114/438 (26%), Positives = 181/438 (41%), Gaps = 69/438 (15%)

Query: 29  FNGYFRAGTGISGNGNADQAVNKAGTGRLGNENDNYYEFGFAEELKTGEQTWKVESMIA- 87
           +NGY+R+G G + +G+  ++      GR GNE   +++    + +   E   +V++++  
Sbjct: 130 YNGYYRSGWGTASHGSP-KSWAIGSLGRFGNEYSGWFDLQLKQRVYQ-EGNKRVDAIVML 187

Query: 88  QGNSG---ANGW---EDGDFNVAQFN---VQAKGLLASDQEAVMWAGKRYYQRKDIHITD 138
            GN G   ++GW     G  N  QF+   V  KG L    EA  W GK    + +I + D
Sbjct: 188 DGNVGQQYSSGWFGDNAGGENYMQFSDMYVNTKGFLPFAPEADFWVGKHGAPKIEIQMLD 247

Query: 139 FYFLNTSGTGG-GIENLSVGNQKLSVALV-QDGDNTNS--------SGYIFDARLANIGL 188
           +    T    G G+EN  VG  K  +ALV +D D+ N         +    D R   I L
Sbjct: 248 WKTQRTDAAAGVGLENWKVGAGKFDIALVREDVDDYNRTLTKSQQLNTNTIDIRYKEIPL 307

Query: 189 WENASLELAMAYNFATEKDSKN---------EVADDGVLVSAILHQGLSNGFNQTVFQYG 239
           W+ ASL +   Y  A +  S+          E  D  +  +++  +  + GFN+  F   
Sbjct: 308 WDKASLMVTGRYVAANQSSSEKYNEGNNGYYEWKDTWMAGTSLTQKFDNGGFNEFSFLLA 367

Query: 240 TAGYGAQAANFWGAGSYYARGTEAFND---ASGFRLLNWGVINLGENWEMGHQLAYLAGS 296
                +  + + G+  Y       + D    +  RL + G   L +N  M + + Y  G+
Sbjct: 368 NNSIASSFSRYAGSSPYTTFNGRYYGDHTNGTAVRLTSQGETYLSDNIIMANAIVYSFGN 427

Query: 297 DIGGQFGGDGANKNTYTGKSFDIDQYSVVVRPMYKWNDTMRTVFEAGY-------NAGEK 349
           DI           +  TG   D +    VVRP + W+   +T  E GY         G+K
Sbjct: 428 DI----------YSYETGAHSDFESIRAVVRPAWIWDKYNQTGVELGYFKQQNKDITGKK 477

Query: 350 ISNGGLATEDFGNAKFTVAQAWAMGDSFWARPELRVYGTYL--LDTENDKAFGDD----- 402
            +  G  T  F   K   +          +RPE+R Y TY+   D + DKA   +     
Sbjct: 478 YNESGYKTTLFHTFKVNTSM-------LTSRPEIRFYATYIKAKDIDLDKAANSNTSSIF 530

Query: 403 ----DTEFVVGIQVEAWW 416
               + +F VG Q E WW
Sbjct: 531 EDGKNDQFAVGAQAEIWW 548