Pairwise Alignments

Query, 385 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., Sel1 domain protein repeat-containing protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 63/268 (23%), Positives = 103/268 (38%), Gaps = 46/268 (17%)

Query: 43  YRKALERNREQERKERLFKAESGHIPTILFLAKEAERNSL------KEALFWYEKAAHLD 96
           Y +   R+  Q  K     AE GH P    L  E  R  L      +EA  W E+AA L 
Sbjct: 240 YGRGTRRDFMQGEKWLSLAAERGH-PQACDLLAEYHRKGLAGPENQEEAFRWTERAAAL- 297

Query: 97  NIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLAAKFETGMAWLYGRGVEVNVS 156
                 G+VR              A+FW                 G+ + YG G   + +
Sbjct: 298 ------GVVR--------------ARFW----------------LGVHYRYGMGTPRDDA 321

Query: 157 RGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTFWYEKAARMGSAEGMMRLGQN 216
           + + L++EAA+A   DA+  +           P  + S  +++  A+ G    ++ LG  
Sbjct: 322 KALHLLREAADAGNPDAMGLVAEMLYRGQGSEPDMAGSVRYFQMGAKAGDLHSLLNLGIL 381

Query: 217 LLHGIGGASDFPMACYWLERASEKGHPEAMYHAGEAWID-RGAHGKAI-AYIWLFLSASM 274
              G G   D+P +     + +E GHP  M   G    +  GA    + A+ WL  +   
Sbjct: 382 HHEGTGVPKDYPRSLQLFGQCAEGGHPRCMTLLGSMLAEGEGAEADMVTAHSWLTRAVLF 441

Query: 275 GYEPAKNLRDLVGGKLGVESIVGLQALA 302
           G   A ++   V  ++  + +V  + +A
Sbjct: 442 GDGDAASVAAEVQQRMTPDQLVHSKNMA 469



 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)

Query: 85  ALFWYEKAAHLDNIPAMYGIVRVCQRIREDVIAKEKAKFWQTCVRGVEGDLA-AKFETGM 143
           A  W EK+A  D  PA   + R+   +    + K++AK +   +   E D+  A+   G+
Sbjct: 179 AATWLEKSADQDFGPAQDVLARLY--LDGTGVRKDEAKAFALAMSAAEQDIINAQALVGV 236

Query: 144 AWLYGRGVEVNVSRGIGLIQEAAEANFIDAILFMGGWCVSKDNIAPTPSDSTF-WYEKAA 202
            + YGRG   +  +G   +  AAE     A   +  +   K    P   +  F W E+AA
Sbjct: 237 LYTYGRGTRRDFMQGEKWLSLAAERGHPQACDLLAEYH-RKGLAGPENQEEAFRWTERAA 295

Query: 203 RMGSAEGMMRLGQNLLHGIGGASDFPMACYWLERASEKGHPEAM 246
            +G       LG +  +G+G   D   A + L  A++ G+P+AM
Sbjct: 296 ALGVVRARFWLGVHYRYGMGTPRDDAKALHLLREAADAGNPDAM 339