Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (555), Expect = 1e-61
 Identities = 116/270 (42%), Positives = 165/270 (61%), Gaps = 1/270 (0%)

Query: 13  MDVKVFRTFLELAKVRHFGRAAENLYLTQAAVSARIKQLENHFDAQLFTRDRNNIKLTSA 72
           MD  + +TFLE+++ RHFG+AAENLYLT++AVS R+KQLE     +LF R RNNI+ T A
Sbjct: 1   MDTDLLKTFLEVSRTRHFGKAAENLYLTRSAVSFRVKQLETILGVELFERQRNNIQPTPA 60

Query: 73  GERLVGYAEVMVATLQQAKFELSLESGKALQLTLGGTPNIWDAYLQHCLSRITDTFEGYG 132
           GER++ +AE ++   ++AK ++SL   ++ QLT+G  PNIWDA+LQ  L  +     G  
Sbjct: 61  GERMLNHAEAVLTAWERAKQDVSLSRLQSTQLTIGAGPNIWDAFLQGNLQSLHKGLPGVA 120

Query: 133 FLAEVMGREQLNRGLLERTLDMAFALDPIKAEELQCKKVADLVLVLVST-KPDDADSVFE 191
              EV+ +  + R L+ERTLDMA + DP K E+ +  ++  + L LVS+  P       +
Sbjct: 121 LRTEVLPQNVMTRQLMERTLDMAISFDPPKMEDFEQIRIGVVQLWLVSSIGPLSLSECLK 180

Query: 192 NRYVYVDWGARFASEHADRHPKAPAPFLRTSTARIALDFILEKGGSAYLPQTMVQPLLDA 251
           + Y+ VDWG  F   HA      P P L TS++RIALDF+L  GGSA+LP  MV P L+ 
Sbjct: 181 HHYIKVDWGTAFNILHAQEFGDMPLPVLHTSSSRIALDFVLNNGGSAFLPDHMVSPYLER 240

Query: 252 GQLHRVSEVNDWQRPLYLSYRKNSSSIEAI 281
           G+L RV       R +Y+ Y   +  +  I
Sbjct: 241 GELCRVEGARSIPRNVYVVYWSQNDRLSQI 270