Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  407 bits (1045), Expect = e-118
 Identities = 195/283 (68%), Positives = 241/283 (85%)

Query: 13  MDVKVFRTFLELAKVRHFGRAAENLYLTQAAVSARIKQLENHFDAQLFTRDRNNIKLTSA 72
           MDVKVF+TFLE+A+ RHFGRAAENLY+TQAAVSARIKQLE+ FD+ LF R+RN+I+LT++
Sbjct: 1   MDVKVFKTFLEVARTRHFGRAAENLYITQAAVSARIKQLESFFDSALFVRNRNSIQLTTS 60

Query: 73  GERLVGYAEVMVATLQQAKFELSLESGKALQLTLGGTPNIWDAYLQHCLSRITDTFEGYG 132
           GERLV YAEVMV+TL+QAK EL+L + KALQLT+ GTPNIWDAYLQHCLS++TD F GYG
Sbjct: 61  GERLVPYAEVMVSTLEQAKNELALTNHKALQLTMAGTPNIWDAYLQHCLSKVTDAFGGYG 120

Query: 133 FLAEVMGREQLNRGLLERTLDMAFALDPIKAEELQCKKVADLVLVLVSTKPDDADSVFEN 192
           FLAE + REQLNR LLERTLDMAFA DP+K+EEL CK+VADL+LVLVST+P D      +
Sbjct: 121 FLAEALSREQLNRNLLERTLDMAFAFDPLKSEELVCKQVADLILVLVSTRPCDQSEALSD 180

Query: 193 RYVYVDWGARFASEHADRHPKAPAPFLRTSTARIALDFILEKGGSAYLPQTMVQPLLDAG 252
           +YVYVDWG RFASEHA+RH + P P+LRTST RIALDFIL+K G+AYLP ++V+P L + 
Sbjct: 181 KYVYVDWGTRFASEHAERHYRMPPPYLRTSTGRIALDFILDKAGAAYLPLSIVEPFLQSK 240

Query: 253 QLHRVSEVNDWQRPLYLSYRKNSSSIEAIVQVEKLMKTLDPFS 295
           QL+ V  V  W RP+YLSYRK+S S+EAI+++E+L+K +DP +
Sbjct: 241 QLYLVEGVEPWNRPIYLSYRKDSGSLEAIIKIEELVKEIDPLT 283