Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., transcriptional regulator HdfR from Klebsiella michiganensis M5al

 Score =  159 bits (403), Expect = 5e-44
 Identities = 97/274 (35%), Positives = 148/274 (54%), Gaps = 6/274 (2%)

Query: 13  MDVKVFRTFLELAKVRHFGRAAENLYLTQAAVSARIKQLENHFDAQLFTRDRNNIKLTSA 72
           MD ++ +TFLE+++ RHFGRAAE LYLTQ+AVS RI+QLEN     LFTR RNNI+LTSA
Sbjct: 1   MDTELLKTFLEVSRTRHFGRAAEALYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTSA 60

Query: 73  GERLVGYAEVMVATLQQAKFELSLESGKALQLTLGGTPNIWDAYLQHCLSRITDTFEGYG 132
           GE+L+ YAE ++ T Q A+ E++  + +  + ++G + ++W+  L   L ++        
Sbjct: 61  GEKLLPYAETLMNTWQAARKEVA-NASRHNEFSIGASASLWECLLNGWLGKLYTEPYNLQ 119

Query: 133 FLAEVMGREQLNRGLLERTLDMAFALDPIKAEELQCKKVADLVLVLVSTKPDDADSVFEN 192
           F A +  R+ L + L ER LD+    +  K +EL  + + +  L L  + P  A    E 
Sbjct: 120 FEARIAQRQSLVKQLHERQLDLLITTESPKMDELSSQLLGNFTLALYCSSP--AKYTNEL 177

Query: 193 RYVYVDWGARFASEHADRHPKAPAPFLRTSTARIALDFILEKGGSAYLPQTMVQPLLDAG 252
            Y+ ++WG  F    A        P L TS+A +A   +    G  +LP    Q   +  
Sbjct: 178 NYLRLEWGPDFQQNEAGLIGNDDIPLLTTSSAELAYQQLSALKGCTWLPVLWAQ---EKN 234

Query: 253 QLHRVSEVNDWQRPLYLSYRKNSSSIEAIVQVEK 286
            LH V++     RPLY  + +NS     I ++ K
Sbjct: 235 NLHTVTDSATLSRPLYAIWLQNSDKQAQIREILK 268