Pairwise Alignments

Query, 452 a.a., 3-methyladenine DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II (RefSeq) from Shewanella sp. ANA-3

 Score =  369 bits (946), Expect = e-106
 Identities = 223/515 (43%), Positives = 291/515 (56%), Gaps = 68/515 (13%)

Query: 6   ELSAEVCQRARMSRDPRFDGRFFVAVKTTGIFCRPICPANLPKEENVEYFSSQALAVSAG 65
           ++SA +C+ ARMSRDPRFDG+FFV V +TGI+CR +CPA  PKEENV YF S   A  AG
Sbjct: 27  QISAGICREARMSRDPRFDGKFFVGVLSTGIYCRTVCPAVAPKEENVRYFDSAIKAAQAG 86

Query: 66  YRPCLRCRPESAPHSWAWKGAETTFLRALTLIEQGELDG----SLETLASRLGISDRYLR 121
            RPCLRCRP+SAP S  WKG  TT  RA+ LIE G L G    ++E LA +LGIS RYL 
Sbjct: 87  LRPCLRCRPDSAPGSNPWKGTNTTLDRAIGLIEAGALSGEHGLTVEALADKLGISSRYLN 146

Query: 122 QLFQRHLGMPPKQYAQIQQLMFAKQLLHTSQISITEVAYASGFQSTRRFNDAFQKLFRLT 181
           +LF    G  PKQ+A  +QL+FAKQLLH +Q+ IT+VA A+GF S RRFN+AFQ+  +LT
Sbjct: 147 KLFTAGFGTSPKQFALYRQLLFAKQLLHQTQLPITQVALAAGFNSIRRFNEAFQQALQLT 206

Query: 182 PTQVRRE------------------RAALPSRN-HLSLAFRGPFDWAHMLDFYRLRAIEG 222
           PTQ+R+                      +P+ +  L   +R P DW+  L FYRLRA+EG
Sbjct: 207 PTQLRKSSQKSTIKIDDGESTELACSQEMPAHSLSLYQYYRPPLDWSAQLAFYRLRAVEG 266

Query: 223 MELIDE-------QSYQRHFVLGEG-TGWFKASMAQSHLDIEFEMER------------L 262
           ME   E       ++   +  L  G T   +   A  H+  E  + R            L
Sbjct: 267 MEWFSESVAPHFHEAIDPNIPLEYGRTLQIEDIRAVVHIVHEAPLHRFKITLTLTPDSPL 326

Query: 263 SDLRHLVARLRRMFDLDADLISIEAHLEQLAP-GLVRRTGIRIPGVWNAWEAGVRAVLGQ 321
           S L+ L+ ++RR+ DLDAD+  IE +L+ L    L  ++G+RIPG    +EAG RAVLGQ
Sbjct: 327 SGLQKLITQVRRILDLDADMQKIEHNLQHLTDLKLSSKSGLRIPGAGAVFEAGCRAVLGQ 386

Query: 322 QVSVKAAIGQLNLLVST----LAASEGSTRYFPTPEQVQMSDLSFLRMPERRKETLKRLA 377
           QVSV  A   LN+LV       + +    R FPTP+ ++ + L  L+MP  RK  L  LA
Sbjct: 387 QVSVVQATKLLNILVEAYGECFSLNGREYRLFPTPQAIRDASLDELKMPGARKLALNALA 446

Query: 378 DYVRLHPMDSPMAWLSLSGIGPWTVDYAQLRGESRSHCFLTGDLIVKKAL---------- 427
            ++   P  S   W+ + GIGPWT+ YA+LRG    + FL  DLIVKK L          
Sbjct: 447 AFICEQPEASVDEWIGVKGIGPWTIAYAKLRGLGDPNIFLHTDLIVKKQLLACVAEQSGL 506

Query: 428 ----------AKFPQLTAESVAPWGSYATFHCWSH 452
                         Q  +  +APWGSY TF  WS+
Sbjct: 507 DIETVKQLDYTALAQRVSADIAPWGSYLTFQLWSN 541