Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., Na+/H+ antiporter NhaD and related arsenite permeases from Pseudomonas stutzeri RCH2

 Score =  178 bits (452), Expect = 3e-49
 Identities = 124/431 (28%), Positives = 219/431 (50%), Gaps = 45/431 (10%)

Query: 39  LLIFAIAYTL-VMLEEYLQLRKSKPVLLAAGLIWAMIGYVYQQTGST-EVARQALEHNLL 96
           L+  A+A  L V+LEE   + K+K  L    L W ++ +++   G   E   ++L  N+ 
Sbjct: 9   LIALAVAALLGVVLEEITHVNKAKVTLFFGTLAWLLL-FIFTPVGEARETVLESLNENIA 67

Query: 97  EYAELLLFLLVAMTYISAMEERRLFDALKAWMINRGFNFHTLFWITGWLAFFISPIADNL 156
           E A L +FL+ AMT+++ + ++ + + L   ++ +  +   L ++T    F  S +ADN+
Sbjct: 68  EIAGLWIFLVAAMTFVAYLNKKGMIENLIYLVLPKRISERALLFLTATFCFVFSSLADNI 127

Query: 157 TTALLMCAVVMKVGGENPKFVSLACINIVIAANAGGAFSPFGDITTLMVWQAGHVSFLEF 216
           T  L+   +++ +  +  K +  A + +V A N+GG     GD+TTLM++ AG V+ L+ 
Sbjct: 128 TATLVSITLILSLQLDRAKTIKFATL-VVFAVNSGGVALITGDVTTLMIFLAGKVAILQL 186

Query: 217 MDLFLPSLANYLVPALVMSLFVPHQTPSSIQEVVELKRGAKR-----IVVLFLFTILSAI 271
           + L +P+    +V A ++S+ +  +       VV+ +R   R     I ++FL TILS I
Sbjct: 187 LALAVPAFVAVMVLAAMLSIGMKGEV------VVQGQRNDVRGVDVAIALIFLCTILSTI 240

Query: 272 GFHAFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAKKTAIAMAKNDEAALKRIGSVVP 331
             +  F  PPV+  + GL+ +     F                   ND            
Sbjct: 241 VGNFLFQIPPVLTFLAGLSVMFLVARFFSD---------------DNDSD---------- 275

Query: 332 FDVFRSISHAEWDTLLFFYGVVMCVGGLSLLGYL-GLVSEILYTEWNPIWANVLVGLLSS 390
             +   +   E++TL FF G+++ VG L  +  L GLV   +Y +   + AN L+G++S+
Sbjct: 276 -PILEYVRQVEFETLFFFLGILLLVGMLKEIRVLDGLVH--IYDQVPAVMANYLMGVMSA 332

Query: 391 VVDNIPVMFAVLSMQPEMSLGNWLLVTLTAGVGGSLLSIGSAAGVALMGAAHGKYTFLSH 450
            +DN+P+  A+L    EM +  W+++T   GVGGSLL IGSA+G+  M    G  TF S+
Sbjct: 333 AIDNVPLTAALLKSGLEMGVAEWMVLTYAVGVGGSLLVIGSASGIVAMSKVPG-LTFGSY 391

Query: 451 LKWTPVILLGY 461
           L++   + + +
Sbjct: 392 LRYMLYLFIAF 402