Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Na+/H+ antiporter NhaD and related arsenite permeases from Pseudomonas stutzeri RCH2

 Score =  169 bits (428), Expect = 2e-46
 Identities = 142/477 (29%), Positives = 218/477 (45%), Gaps = 76/477 (15%)

Query: 40  LIFAIAYTLVMLEEYLQLRKSKPVLLAAGLIWAMIGYVYQQ------------TGSTEVA 87
           ++F I Y  +  E  L++ K+   +L A L W ++     Q              S+ V 
Sbjct: 7   VVFVIGYLCIAFEHPLKIDKAAAAILTAVLTWTILVLGADQILPLLQPGSHDPADSSAVV 66

Query: 88  RQALEHNLLEYAELLLFLLVAMTYISAMEERRLFDALKAWMINRGFNFHTLFWITGWLAF 147
            ++L H+L E +E+L FLL AMT +  ++    F  +   +  R    H L WI G+L F
Sbjct: 67  VESLRHHLGEVSEILFFLLGAMTIVELIDSHEGFKVITDRIQTRK-RVH-LLWIIGFLTF 124

Query: 148 FISPIADNLTTALLMCAVVMKVGGENPK---FVSLACINIVIAANAGGAFSPFGDITTLM 204
           F+S   DNLTT ++M +++ K+    P+   FV +    +VIAANAGGA+SP GD+TT M
Sbjct: 125 FLSAALDNLTTTIVMVSLLRKLIRGRPERWLFVGV----VVIAANAGGAWSPIGDVTTTM 180

Query: 205 VWQAGHVSFLEFM-DLFLPSLANYLVPALVMSLFVPHQTPSSIQEVVELKRGAKRIVV-- 261
           +W    +S    +  LFLPSL   LVP +++S  +  + P         ++      V  
Sbjct: 181 LWIGSQISASGVITGLFLPSLVCLLVPLIILSFRLRGEAPRPRARAHLAEKHPPTTTVFE 240

Query: 262 ------LFLFTILSAIGFHAFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAKKTAIAM 315
                 L L  +L    F    H PP +G++ GL  L     F+ +              
Sbjct: 241 RNLVLGLGLAALLFVPVFKTVTHLPPYMGILFGLGVLWVTTEFIHRN------------- 287

Query: 316 AKNDEAALKRIGSVVPFDVFRSISHAEWDTLLFFYGVVMCVGGLSLLGYLGLVSEILYTE 375
            KN E          P  V   +   +  ++LFF G+++ V  L+  G+L  V+  L   
Sbjct: 288 -KNAE-------DKHPLSVVGVLRKVDTPSVLFFLGILLAVSSLATAGHLTQVATALRES 339

Query: 376 WNPIW-ANVLVGLLSSVVDNIPVMFAVLSMQPEMSL--------------------GN-W 413
              I+     +GLLS+VVDN+P++   + M P +S                     GN W
Sbjct: 340 LGHIYPITYAIGLLSAVVDNVPLVAGAMKMYPLVSPAVLAASSPEETSWLSQFVVDGNFW 399

Query: 414 LLVTLTAGVGGSLLSIGSAAGVALMGAAHGKYTFLSHLKWTPVI-LLGYVVSIVLHL 469
            ++ L AG GGS L IGSAAGVA MG    K +F  ++K   ++  LGY      ++
Sbjct: 400 EMLALCAGTGGSTLIIGSAAGVAAMGME--KISFTWYIKRVSLLAFLGYTAGAATYI 454