Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., citrate transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  187 bits (475), Expect = 6e-52
 Identities = 127/443 (28%), Positives = 218/443 (49%), Gaps = 39/443 (8%)

Query: 39  LLIFAIAYTL-VMLEEYLQLRKSKPVLLAAGLIWAMIGYVYQQTGSTEVARQALEHNLLE 97
           L+I AI   L ++ EE   L K+K  L    + W  +         TE+    L  NLLE
Sbjct: 6   LIILAILALLSIIFEEVTHLNKAKTTLFLGCISWVTLFIASGGGEHTELVAHELNENLLE 65

Query: 98  YAELLLFLLVAMTYISAMEERRLFDALKAWMINRGFNFHTLFWITGWLAFFISPIADNLT 157
            A L LFL+  MT+++ +  + +   +   +  +  +   L       A  +S   DN+T
Sbjct: 66  IATLWLFLMSTMTFVAYLNAKGMIQIMVQKIFPQRVSVRMLMIQVALFALILSAFCDNVT 125

Query: 158 TALLMCAVVMKVGGENPKFVSLACINIVIAANAGGAFSPFGDITTLMVWQAGHVSFLEFM 217
             L+   ++     +      +A + I+ A N+GG     GD+TTLM++ +GHV   E +
Sbjct: 126 ATLVSLGLLTTFKLDKQMRRRMAVL-IIFAVNSGGVALITGDVTTLMIFLSGHVHISELL 184

Query: 218 DLFLPSLANYLVPALVMSLFVPHQTPSSIQEVVELKRGAK----RIVVLFLFTILSAIGF 273
            LF+P+  +  + A++ S+    +  ++      +KR  +     I  +F  TI+  +  
Sbjct: 185 ILFIPAAVSVFLLAILFSMNAKGEVSTT-----PIKRAYQPVDIAIAAIFFITIIMTMAL 239

Query: 274 HAFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAKKTAIAMAKNDEAALKRIGSVVPFD 333
           +  F  PPV+  + GL+ +   G+ +R                  D+  +K         
Sbjct: 240 NVLFGIPPVLTFLTGLSVMFLVGHTIR-----------------TDKEEIK--------- 273

Query: 334 VFRSISHAEWDTLLFFYGVVMCVGGLSLLGYLGLVSEILYTEWNPIWANVLVGLLSSVVD 393
           +   I   E+DTLLFF G+++ VG L  +G L L++++ Y   +P  +N + G+ S+++D
Sbjct: 274 ILEYIRQVEYDTLLFFLGILLLVGMLKEIGTLELLTQV-YAMHDPNISNFVTGMGSAILD 332

Query: 394 NIPVMFAVLSMQPEMSLGNWLLVTLTAGVGGSLLSIGSAAGVALMGAAHGKYTFLSHLKW 453
           N+P+  A+L  +P +S   WL +T   GVGGSLL IGSAAG+  M     + TF+++LK+
Sbjct: 333 NVPLTAALLKAEPVLSTPEWLGLTYAVGVGGSLLVIGSAAGIIAMSKVK-ELTFVTYLKY 391

Query: 454 TPVILLGYVVSIVLHLLLNHQSF 476
            P ++L YVV   L LL+ +Q +
Sbjct: 392 VPSLMLSYVVGYGLTLLIAYQFY 414