Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., citrate transporter (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (481), Expect = 1e-52
 Identities = 125/442 (28%), Positives = 221/442 (50%), Gaps = 38/442 (8%)

Query: 39  LLIFAIAYTLVMLEEYLQLRKSKPVLLAAGLIWAMIGYVYQQTGSTEVARQALEHNLLEY 98
           + +  +A   ++ EE   + K+K  L    + W  +    +      +  + L+HNLLE 
Sbjct: 7   ITLAVLALLSIIFEEVTHINKAKTTLFFGCVAWITLFVAARDPSHQHLVAEELDHNLLEI 66

Query: 99  AELLLFLLVAMTYISAMEERRLFDALKAWMINRGFNFHTLFWITGWLAFFISPIADNLTT 158
           A L LFL+  MT+++ +  + +   L   +  +  +   L       +  +S I DN+T 
Sbjct: 67  ATLWLFLMSTMTFVAYLNAKGMIQILVQKLFPQKVSVRMLMIQVALFSLVLSAICDNVTA 126

Query: 159 ALLMCAVVMKVGGENPKFVSLACINIVIAANAGGAFSPFGDITTLMVWQAGHVSFLEFMD 218
            L+   ++     E+     ++ + I+ A N+GG     GD+TTLM++  GHV   + + 
Sbjct: 127 TLVSLGLLTTFQLESQMKRRMSVL-IIFAVNSGGVALITGDVTTLMIFLGGHVHISQLLM 185

Query: 219 LFLPSLANYLVPALVMSLFVPHQTPSSIQEVVELKRGAKR----IVVLFLFTILSAIGFH 274
           LF+P+ A+ ++ A++ SL               +KR   +    I ++FL TI+  +  +
Sbjct: 186 LFIPAAASVMLLAVLFSL-----KAEGYVSTTPIKRQYSKLDVFIALIFLITIIMTMVLN 240

Query: 275 AFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAKKTAIAMAKNDEAALKRIGSVVPFDV 334
            FF  PPV+  + GL+ +     FL  TL RS  ++                       +
Sbjct: 241 IFFGIPPVLTFLSGLSVM-----FLMGTLQRSNKEE---------------------LQI 274

Query: 335 FRSISHAEWDTLLFFYGVVMCVGGLSLLGYLGLVSEILYTEWNPIWANVLVGLLSSVVDN 394
              I   E++TLLFF G+++ VG L  +G L L++E+ Y +++P  +N + G+ S+++DN
Sbjct: 275 LEYIRQVEFETLLFFLGILLLVGMLKEIGTLHLLTEV-YAKFDPNISNFVTGIGSAILDN 333

Query: 395 IPVMFAVLSMQPEMSLGNWLLVTLTAGVGGSLLSIGSAAGVALMGAAHGKYTFLSHLKWT 454
           +P+  A+L  +P ++   WL +T + GVGGSLL IGSAAG+  M     + TF+++LK+ 
Sbjct: 334 VPLTAALLKAEPVLNTPEWLGLTYSVGVGGSLLVIGSAAGIIAMSKVK-ELTFVTYLKYV 392

Query: 455 PVILLGYVVSIVLHLLLNHQSF 476
           P + L Y     L LLL ++ F
Sbjct: 393 PALALCYTCGYGLTLLLAYEFF 414