Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Na+/H+ antiporter (RefSeq) from Shewanella loihica PV-4

 Score =  624 bits (1610), Expect = 0.0
 Identities = 310/467 (66%), Positives = 377/467 (80%), Gaps = 2/467 (0%)

Query: 12  LFSPLSLASTPD--GQALDFTHSTIGYAALLIFAIAYTLVMLEEYLQLRKSKPVLLAAGL 69
           LFSP   AS+ +  GQ LD T +  GY A++IF +AY LVM EE L LRKSKPVL+AAGL
Sbjct: 25  LFSPAVFASSGEAHGQLLDLTATGAGYVAVVIFVLAYLLVMGEEVLHLRKSKPVLVAAGL 84

Query: 70  IWAMIGYVYQQTGSTEVARQALEHNLLEYAELLLFLLVAMTYISAMEERRLFDALKAWMI 129
           IW +IGY+Y Q G +E++  A +HNLLEYAELLLFLLVAMTYI+AMEER LFDAL+AWM+
Sbjct: 85  IWGIIGYIYVQHGMSELSETAFKHNLLEYAELLLFLLVAMTYINAMEERNLFDALRAWMV 144

Query: 130 NRGFNFHTLFWITGWLAFFISPIADNLTTALLMCAVVMKVGGENPKFVSLACINIVIAAN 189
            +GF+  T+FW+TG++AFFISPIADNLTTALLMCAVVMKVGG+N KF++LACINIV+AAN
Sbjct: 145 GKGFSQRTVFWLTGFMAFFISPIADNLTTALLMCAVVMKVGGDNKKFIALACINIVVAAN 204

Query: 190 AGGAFSPFGDITTLMVWQAGHVSFLEFMDLFLPSLANYLVPALVMSLFVPHQTPSSIQEV 249
           AGGAFSPFGDITTLMVWQ G V F +F+DLF+PSL N+LVPA +MS F+ +Q   + +E 
Sbjct: 205 AGGAFSPFGDITTLMVWQKGVVHFEQFVDLFIPSLVNFLVPAAIMSAFIVNQVQEAEEEK 264

Query: 250 VELKRGAKRIVVLFLFTILSAIGFHAFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAK 309
           V +KRGA+RIV LFL TI +A+  H+    PPV+GMM GL +LQFFG++LRK+  +++ K
Sbjct: 265 VMMKRGARRIVGLFLLTIATAVCTHSVLGLPPVLGMMTGLGFLQFFGFYLRKSFPKAVLK 324

Query: 310 KTAIAMAKNDEAALKRIGSVVPFDVFRSISHAEWDTLLFFYGVVMCVGGLSLLGYLGLVS 369
               A   N+   L+++G+VVPFDVF  I+ AEWDTLLFFYGVV+CVGGL  +GYL LVS
Sbjct: 325 AKEQAERDNNLKRLEQLGNVVPFDVFSRIARAEWDTLLFFYGVVLCVGGLGFMGYLSLVS 384

Query: 370 EILYTEWNPIWANVLVGLLSSVVDNIPVMFAVLSMQPEMSLGNWLLVTLTAGVGGSLLSI 429
           E +YT W+  +AN+ VG+LSS+VDNIPVMFAVL+M PEM+LG WLLVTLTAGVGGSLLSI
Sbjct: 385 EAMYTHWDVTYANIAVGVLSSIVDNIPVMFAVLTMNPEMALGQWLLVTLTAGVGGSLLSI 444

Query: 430 GSAAGVALMGAAHGKYTFLSHLKWTPVILLGYVVSIVLHLLLNHQSF 476
           GSAAGVALMG A G YTF SHLKWTPVI LGY+ SI++HL LN   F
Sbjct: 445 GSAAGVALMGQARGIYTFASHLKWTPVIALGYIASILVHLWLNSSLF 491