Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., hypothetical Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.1 bits (170), Expect = 6e-17
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 86  VARQALEHNLLEYAELLLFLLVAMTYISAMEERRLFDALKAWMINRGFNFHTLFWITGWL 145
           VA Q L  NLLE A L LFL+  M +++ +  + +   +   +  +  +   L    G  
Sbjct: 12  VAHQ-LNENLLEIAMLWLFLMSTMIFVAYLNAKGMTQIMVQKLFPQQVSVRILMLQVGLF 70

Query: 146 AFFISPIADNLTTALLMCAVV--MKVGGENPKFVSLACINIVIAANAGGAFSPFGDITTL 203
           +  +S   DN+T  L+   ++   K+G +  + +++    I+ A N+GG     GD+TTL
Sbjct: 71  SLVLSAFCDNVTATLVSLGLLTTFKLGKQMRRRMAVL---IIFAVNSGGVALITGDVTTL 127

Query: 204 MVWQAGHVSFLEFMDLFLPSLANYLVPALVMSL---FVPHQTP-SSIQEVVELKRGAKRI 259
           M++ AGH    E + LF+PS  + ++ A + SL    +   TP     + VEL      I
Sbjct: 128 MIFLAGHEHISELLMLFIPSAVSVILLATLFSLKAEGIVSTTPIKHSYQTVEL-----LI 182

Query: 260 VVLFLFTIL 268
            ++F FTIL
Sbjct: 183 ALVFFFTIL 191