Pairwise Alignments

Query, 477 a.a., Na+/H+ antiporter NhaD from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  632 bits (1629), Expect = 0.0
 Identities = 311/467 (66%), Positives = 372/467 (79%)

Query: 10  LTLFSPLSLASTPDGQALDFTHSTIGYAALLIFAIAYTLVMLEEYLQLRKSKPVLLAAGL 69
           L+ FSP   A T  G+ LD T +T+GY A+ +F +AY LVM EE L LRKSKPVL+AAG+
Sbjct: 10  LSGFSPAVWAMTEGGERLDLTAATVGYIAVCVFVLAYLLVMAEETLHLRKSKPVLVAAGI 69

Query: 70  IWAMIGYVYQQTGSTEVARQALEHNLLEYAELLLFLLVAMTYISAMEERRLFDALKAWMI 129
           IW MIG+VY Q G +EV+  A +HNLLEYAELLLFLLVAMTYI+AMEER LFDA++ W++
Sbjct: 70  IWGMIGFVYVQNGMSEVSETAFKHNLLEYAELLLFLLVAMTYINAMEERNLFDAIRGWLV 129

Query: 130 NRGFNFHTLFWITGWLAFFISPIADNLTTALLMCAVVMKVGGENPKFVSLACINIVIAAN 189
            RGF+  T+FW+TG++AFFISP+ADNLTTALLMCAVVMKVG    KF++LACINIV+AAN
Sbjct: 130 GRGFSLRTVFWLTGFMAFFISPVADNLTTALLMCAVVMKVGAGQRKFITLACINIVVAAN 189

Query: 190 AGGAFSPFGDITTLMVWQAGHVSFLEFMDLFLPSLANYLVPALVMSLFVPHQTPSSIQEV 249
           AGG FSPFGDITTLMVWQ G V F +F  LF+P+L N+ +PA +MS+F+PH  P   +E 
Sbjct: 190 AGGTFSPFGDITTLMVWQKGLVHFADFFYLFIPALVNFALPAAIMSIFIPHYVPQPEKEQ 249

Query: 250 VELKRGAKRIVVLFLFTILSAIGFHAFFHFPPVIGMMMGLAYLQFFGYFLRKTLARSLAK 309
           V  K GAKRIV LFL TI +A+  H+F   PPV+GMM GL +LQFFGY+LRKT  RS+A+
Sbjct: 250 VYTKPGAKRIVALFLLTIATAVCAHSFLGMPPVLGMMTGLGFLQFFGYYLRKTFDRSVAR 309

Query: 310 KTAIAMAKNDEAALKRIGSVVPFDVFRSISHAEWDTLLFFYGVVMCVGGLSLLGYLGLVS 369
           + A A  + DE  L ++GSVVPFDVF  IS AEWDTLLFFYGVV+CVGGL  +GYL LVS
Sbjct: 310 ERAKAELRQDEQRLLQLGSVVPFDVFSRISRAEWDTLLFFYGVVLCVGGLGFMGYLSLVS 369

Query: 370 EILYTEWNPIWANVLVGLLSSVVDNIPVMFAVLSMQPEMSLGNWLLVTLTAGVGGSLLSI 429
           E LY+ W+  +ANV +GLLSSVVDNIPVMFAVL+M PEM+LG WLLVTLTAGVGGSLLSI
Sbjct: 370 EALYSNWDATYANVAIGLLSSVVDNIPVMFAVLTMNPEMALGQWLLVTLTAGVGGSLLSI 429

Query: 430 GSAAGVALMGAAHGKYTFLSHLKWTPVILLGYVVSIVLHLLLNHQSF 476
           GSAAGVALMG A G YTF +HL+WTPVI LGYV SI++H+ LN   F
Sbjct: 430 GSAAGVALMGQARGIYTFGAHLRWTPVIALGYVASILVHMWLNAAMF 476