Pairwise Alignments

Query, 298 a.a., EamA family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., integral membrane domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 3/211 (1%)

Query: 68  RTQQFGWHLLRVFLAVIGIQLWLWALAYPVPIWQGIALLMTSPLFATIGSGLWLREKVGM 127
           +TQ    HL R  + V+G    +  L   +P+    +L  ++PL   +     L E+V  
Sbjct: 61  QTQHLPIHLWRASVGVVGALFLILGLM-ALPLATVSSLFYSAPLIIMLLGWWLLGERVSA 119

Query: 128 ARWVATLTGFIGAMIILEPWADDFNLASLLPVGAAFFWASYSLMVKKLSSHDSPSTMVVY 187
            +W+  + GF G ++IL P       + L+ +GAA  ++   L+++KL + +SP   ++ 
Sbjct: 120 GQWLCAILGFGGILLILAP--TQIGWSGLMVLGAAVTFSVCQLLLRKLPATESPVVTILL 177

Query: 188 LLLLITPFNLLLALPDWQMPNGQTVWLLLIGAGVMTALAQWAIAKAYAVADASFVQPFDH 247
             LL  P  L+ A  +        +  + + + +      W    AY  A A+ +   ++
Sbjct: 178 YNLLGLPIALIFAAFNNFAGFSWALLGVALASNLFLMAYHWFCVLAYRRARAADIAIGEY 237

Query: 248 AKLPLNVLAGWLVFGWVPPGRLWLGAAIIVL 278
           + L   V  GW  F   P   +W GAA++VL
Sbjct: 238 SGLLFIVALGWWWFDEWPGEHVWWGAALVVL 268



 Score = 23.5 bits (49), Expect = 0.006
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 79  VFLAVIGIQLWLWALAYPVP-IWQGIALLMTSPLFATIGSGLW 120
           +F+  +G   W W   +P   +W G AL++   L + + + LW
Sbjct: 241 LFIVALG---WWWFDEWPGEHVWWGAALVVLPSLISPLIAHLW 280